RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 ARID1AO14497 2285 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 UNC119BA6NIH7 251 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 OVOL3O00110 214 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 ACOT8O14734 319 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 OR10H3O60404 316 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 RAB36O95755 333 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 ZNF26P17031 533 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 HOXB6P17509 224 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 FPR3P25089 353 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 HMGA2P52926 109 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 ADAM8P78325 824 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 NKX6-1P78426 367 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 CHRNB3Q05901 458 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 NPRL3Q12980 569 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 FAM98BQ52LJ0 330 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 Q5PR19 223 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 THEM4Q5T1C6 240 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 GPR139Q6DWJ6 353 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 PGM2L1Q6PCE3 622 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 PRSS57Q6UWY2 283 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 FAM122BQ7Z309 247 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 ZER1Q7Z7L7 766 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 LINC00471Q8N535 108 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 OR4F15Q8NGB8 312 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 PERPQ96FX8 193 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 POM121Q96HA1 1249 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 RBP7Q96R05 134 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 NOX3Q9HBY0 568 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 LYVE1Q9Y5Y7 322 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 DSCAMO60469 2012 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 USF3Q68DE3 2245 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 ZFHX3Q15911 3703 aa13.4□□□□□ -0.26
PRPF40B-211ENST00000551063 AQP12BA6NM10 295 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 AHCYL1O43865 530 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 SLC2A10O95528 541 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 CELA3BP08861 270 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 CD79AP11912 226 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 NPR2P20594 1047 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 GIPRP48546 466 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 RAB1AP62820 205 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 ERVK-25P63136 954 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 MRPS34P82930 218 aaKnown RBP13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 MYBPC1Q00872 1141 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 FMODQ06828 376 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 BNIP1Q12981 228 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 MYPOPQ86VE0 399 aaPredicted RBP13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 SKA3Q8IX90 412 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 AQP12AQ8IXF9 295 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 FBXL14Q8N1E6 418 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 MUC15Q8N387 334 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 NUP37Q8NFH4 326 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 GTPBP3Q969Y2 492 aaKnown RBP13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 ZNF570Q96NI8 536 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 GPA33Q99795 319 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 SEC61A2Q9H9S3 476 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 NRIP3Q9NQ35 241 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 CBLN4Q9NTU7 201 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 GRHPRQ9UBQ7 328 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 ADAM18Q9Y3Q7 739 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 UGT2A1Q9Y4X1 527 aa13.39□□□□□ -0.27
PRPF40B-211ENST00000551063 IGHV2OR16-5A0A0B4J2B6 119 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 TNFRSF11BO00300 401 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 XKRYO14609 159 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 DNAJC8O75937 253 aaPredicted RBP13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 CD8AP01732 235 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 RAP2AP10114 183 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 APEHP13798 732 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 ZNF14P17017 642 aaPredicted RBP13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 CALCRP30988 508 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 SDHAP31040 664 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 APOBEC3AP31941 199 aaPredicted RBP13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 PTDSS1P48651 473 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 FABP6P51161 128 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 FXYD6P3P58550 94 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 GK3PQ14409 553 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 SLC36A2Q495M3 483 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 MESTQ5EB52 335 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 C11orf71Q6IPW1 123 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 C1orf94Q6P1W5 598 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 SLC25A47Q6Q0C1 308 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 SMARCD3Q6STE5 483 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 THSD4Q6ZMP0 1018 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 DPY19L2P2Q6ZN68 376 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 SLC16A14Q7RTX9 510 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 WFDC11Q8NEX6 87 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 OR4C15Q8NGM1 316 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 FANK1Q8TC84 345 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 TRMT61AQ96FX7 289 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 Q96M85 177 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 ZNF75AQ96N20 296 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 SIAEQ9HAT2 523 aa13.38□□□□□ -0.27
PRPF40B-211ENST00000551063 IGKV1D-43A0A0B4J1Z2 117 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 ATP5HO75947 161 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 TXNDC12O95881 172 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 SLC6A6P31641 620 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 GSSP48637 474 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 RASSF2P50749 326 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 RPS6KA3P51812 740 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 ATP5J2P56134 94 aa13.37□□□□□ -0.27
PRPF40B-211ENST00000551063 TSPAN31Q12999 210 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms