RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-218	ENST00000550692	RNF13	O43567	381 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	SEC14L2	O76054	403 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	WNT11	O96014	354 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	ALPL	P05186	524 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	CD99	P14209	185 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	IFNGR1	P15260	489 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	GPR4	P46093	362 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	DAP	P51397	102 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	ALDH3A2	P51648	485 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	CDH11	P55287	796 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	BID	P55957	195 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	TUBA1B	P68363	451 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	TUBA4A	P68366	448 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	DAG1	Q14118	895 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	PGGHG	Q32M88	737 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	RFX4	Q33E94	735 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	KDM4D	Q6B0I6	523 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	RPL13AP3	Q6NVV1	102 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	ANKRD16	Q6P6B7	361 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	SLC22A25	Q6T423	547 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	RASSF6	Q6ZTQ3	369 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	TUBA1A	Q71U36	451 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	SLC35D2	Q76EJ3	337 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	NANOGNB	Q7Z5D8	188 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	MEX3D	Q86XN8	651 aa	Known RBP	9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	LRRC75A-AS1	Q8N1F1	130 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	PACRGL	Q8N7B6	248 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	ANKK1	Q8NFD2	765 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	OR51A7	Q8NH64	312 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	MAGEE2	Q8TD90	523 aa	Predicted RBP	9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	VCX	Q9H320	206 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	VCX3B	Q9H321	246 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	SMURF2	Q9HAU4	748 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	OBP2B	Q9NPH6	170 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	PAPOLB	Q9NRJ5	636 aa	Known RBP	9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	IL20	Q9NYY1	176 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	USE1	Q9NZ43	259 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	HIF3A	Q9Y2N7	669 aa		9.82	□□□□□ -0.84
BRF1-218	ENST00000550692	ACAN	P16112	2415 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	PLCE1	Q9P212	2302 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	ZNF469	Q96JG9	3925 aa	Predicted RBP	9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	ARHGEF9	O43307	516 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	TSPAN19	P0C672	248 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	OSM	P13725	252 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	AQP2	P41181	271 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	PTH2R	P49190	550 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	RAD23A	P54725	363 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	SH3BGR	P55822	239 aa	Predicted RBP	9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	UBE2N	P61088	152 aa	Known RBP	9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	ESRRG	P62508	458 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	RPS4X	P62701	263 aa	Known RBP	9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	PPP2R2B	Q00005	443 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	MELK	Q14680	651 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	LRRC36	Q1X8D7	754 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692		Q5PR19	223 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	C1QTNF12	Q5T7M4	302 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	OGFRL1	Q5TC84	451 aa	Predicted RBP	9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	SHE	Q5VZ18	495 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	LPCAT4	Q643R3	524 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	SMARCD3	Q6STE5	483 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	B3GLCT	Q6Y288	498 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	PARP8	Q8N3A8	854 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	CLDN22	Q8N7P3	220 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	OR13C2	Q8NGS9	318 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	OR6N1	Q8NGY5	312 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	RADIL	Q96JH8	1075 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	LRR1	Q96L50	414 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	SLC29A1	Q99808	456 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	NIPSNAP1	Q9BPW8	284 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	GSX2	Q9BZM3	304 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	CXorf56	Q9H5V9	222 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	KRT84	Q9NSB2	600 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	ZNF701	Q9NV72	531 aa	Predicted RBP	9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	POU2F3	Q9UKI9	436 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	SIGLEC7	Q9Y286	467 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	POFUT2	Q9Y2G5	429 aa		9.81	□□□□□ -0.84
BRF1-218	ENST00000550692	TRAV27	A0A087WT01	109 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	ARPC4-TTLL3	A0A0A6YYG9	625 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	IGHV1-18	A0A0C4DH31	117 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	ZNF503-AS2	A6NEH8	195 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	ZNF99	A8MXY4	864 aa	Predicted RBP	9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	ATP6V1G2-DDX39B	F2Z307	99 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	OVOL3	O00110	214 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	SOCS2	O14508	198 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	EI24	O14681	340 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	NDUFB2	O95178	105 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	BCL10	O95999	233 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	CD8A	P01732	235 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	F13B	P05160	661 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	HOXB1	P14653	301 aa	Predicted RBP	9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	PAX1	P15863	534 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	ZNF26	P17031	533 aa	Predicted RBP	9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	IGFBP5	P24593	272 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	PEX2	P28328	305 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	RPL4	P36578	427 aa	Known RBP	9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	CSNK1A1	P48729	337 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	RPL18	Q07020	188 aa	Known RBP	9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	FHL1	Q13642	323 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	ALG10	Q5BKT4	473 aa		9.8	□□□□□ -0.84
BRF1-218	ENST00000550692	DPY19L2P2	Q6ZN68	376 aa		9.8	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms