RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 UGT1A5P35504 534 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 DDOSTP39656 456 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 MAGEA8P43361 318 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 HLCSP50747 726 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 UCNP55089 124 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 STX17P56962 302 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 NDPQ00604 133 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 NSUN5P1Q3KNT7 163 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 MAJINQ3KP22 176 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 PDZK1Q5T2W1 519 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 GPRC6AQ5T6X5 926 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 TRIM69Q86WT6 500 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 VRK2Q86Y07 508 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 ZNF100Q8IYN0 542 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 C7orf33Q8WU49 177 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 CHCHD10Q8WYQ3 142 aaPredicted RBP3.44□□□□□ -1.86
LIMA1-205ENST00000550592 DYNLL2Q96FJ2 89 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 SEC22AQ96IW7 307 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 MTMR9Q96QG7 549 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 NPY6RQ99463 290 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 ARHGDIGQ99819 225 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 SLC39A3Q9BRY0 314 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 SELENOIQ9C0D9 397 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 SUDS3Q9H7L9 328 aaPredicted RBP3.44□□□□□ -1.86
LIMA1-205ENST00000550592 YY1AP1Q9H869 796 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 MCCC2Q9HCC0 563 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 RGS18Q9NS28 235 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 IL17CQ9P0M4 197 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 COPS3Q9UNS2 423 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 UGT2A1Q9Y4X1 527 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 ASB3Q9Y575 518 aa3.44□□□□□ -1.86
LIMA1-205ENST00000550592 NID2Q14112 1375 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 RAI1Q7Z5J4 1906 aaPredicted RBP3.43□□□□□ -1.86
LIMA1-205ENST00000550592 LOXHD1Q8IVV2 1947 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 IGKV1D-8A0A087WSZ0 117 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 SNTNA6NMZ2 147 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 KLLNB2CW77 178 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 B4GALT2O60909 372 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 ATP5LO75964 103 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 DIRAS1O95057 198 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 NPR2P20594 1047 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 CCNE1P24864 410 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 CCR1P32246 355 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 QARSP47897 775 aaKnown RBP3.43□□□□□ -1.86
LIMA1-205ENST00000550592 LYZP61626 148 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 TNFRSF17Q02223 184 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 ASPHQ12797 758 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 CLEC18BQ6UXF7 455 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 C11orf53Q8IXP5 236 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 CCDC65Q8IXS2 484 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 PRR22Q8IZ63 422 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 ALLCQ8N6M5 410 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 CCDC71LQ8N9Z2 235 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 OR52I1Q8NGK6 324 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 LINC01006Q8NI28 216 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 DNAJB3Q8WWF6 145 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 SHC3Q92529 594 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 FGF13Q92913 245 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 FGF11Q92914 225 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 MARC2Q969Z3 335 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 ZNF707Q96C28 371 aaPredicted RBP3.43□□□□□ -1.86
LIMA1-205ENST00000550592 PAGE5Q96GU1 130 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 MSANTD3Q96H12 275 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 GON7Q9BXV9 100 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 REEP4Q9H6H4 257 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 FOLH1BQ9HBA9 442 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 SH2D2AQ9NP31 389 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 POLE4Q9NR33 117 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 PLSCR3Q9NRY6 295 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 KIF25Q9UIL4 384 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 MED13Q9UHV7 2174 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 THADAQ6YHU6 1953 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 DOCK6Q96HP0 2047 aa3.43□□□□□ -1.86
LIMA1-205ENST00000550592 LAMA4Q16363 1823 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 RELNP78509 3460 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 HELTA6NFD8 242 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 RGS16O15492 202 aaPredicted RBP3.42□□□□□ -1.86
LIMA1-205ENST00000550592 TIMM8AO60220 97 aaPredicted RBP3.42□□□□□ -1.86
LIMA1-205ENST00000550592 STAMBPO95630 424 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 RBMY1CP0DJD4 496 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 PKNOX1P55347 436 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 SEMG2Q02383 582 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 ZMYND11Q15326 602 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 KLHL38Q2WGJ6 581 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 HSDL1Q3SXM5 330 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 CCDC14Q49A88 953 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 CARD16Q5EG05 197 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 DMRTC1Q5HYR2 192 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 OR2G6Q5TZ20 316 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 OTPQ5XKR4 325 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 Q6ZS52 159 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 DHDDSQ86SQ9 333 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 FTMTQ8N4E7 242 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 OR8J1Q8NGP2 316 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 MAGEE2Q8TD90 523 aaPredicted RBP3.42□□□□□ -1.86
LIMA1-205ENST00000550592 DNAJA4Q8WW22 397 aaPredicted RBP3.42□□□□□ -1.86
LIMA1-205ENST00000550592 ELSPBP1Q96BH3 223 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 C10orf35Q96D05 121 aa3.42□□□□□ -1.86
LIMA1-205ENST00000550592 PHYHIPLQ96FC7 376 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms