RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 BIDP55957 195 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 CARD18P57730 90 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 CLRN1P58418 232 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 MELKQ14680 651 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 WIPI1Q5MNZ9 446 aaPredicted RBP11.23□□□□□ -0.61
CACNB3-217ENST00000550483 ATP1A1-AS1Q5TC04 95 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 LIPKQ5VXJ0 399 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 RPL22L1Q6P5R6 122 aaKnown RBP11.23□□□□□ -0.61
CACNB3-217ENST00000550483 KCTD18Q6PI47 426 aaPredicted RBP11.23□□□□□ -0.61
CACNB3-217ENST00000550483 PAMR1Q6UXH9 720 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 GALNTL5Q7Z4T8 443 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 GGNQ86UU5 652 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 ZFAND2BQ8WV99 257 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 THRSPQ92748 146 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 ADGRG7Q96K78 797 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 SMAD5Q99717 465 aaKnown RBP11.23□□□□□ -0.61
CACNB3-217ENST00000550483 CHCHD6Q9BRQ6 235 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 TTYH2Q9BSA4 534 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 DCUN1D5Q9BTE7 237 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 DCSTAMPQ9H295 470 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 PLA2G3Q9NZ20 509 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 LAMP5Q9UJQ1 280 aa11.23□□□□□ -0.61
CACNB3-217ENST00000550483 A0A0J9YW62 118 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 LOC100506127A0A0U1RQW1 187 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 PINLYPA6NC86 204 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 A6NL46 340 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 EIF1AYO14602 144 aaKnown RBP11.22□□□□□ -0.61
CACNB3-217ENST00000550483 PLPP2O43688 288 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 AQP8O94778 261 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 HLA-DQA2P01906 255 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 KRT8P05787 483 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 RFPL3SP0C7P2 107 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 PGA4P0DJD7 388 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 PGA3P0DJD8 388 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 HLA-DOBP13765 273 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 ZNF823P16415 610 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 TCEA1P23193 301 aaKnown RBP11.22□□□□□ -0.61
CACNB3-217ENST00000550483 PCSK6P29122 969 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 SHC1P29353 583 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 PTGS2P35354 604 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 ENTPD1P49961 510 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 CCL11P51671 97 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 AQP6Q13520 282 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 SLC10A1Q14973 349 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 SPCS2Q15005 226 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 ABLIM2Q6H8Q1 611 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 SLC18B1Q6NT16 456 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 B3GLCTQ6Y288 498 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 GPAT4Q86UL3 456 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 KLBQ86Z14 1044 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 GLB1L2Q8IW92 636 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 TMEM251Q8N6I4 163 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 OR9K2Q8NGE7 335 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 OR51L1Q8NGJ5 315 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 OR6N2Q8NGY6 317 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 OTOSQ8NHW6 89 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 DYNC2LI1Q8TCX1 351 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 PHYHIPQ92561 330 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 C4orf36Q96KX1 117 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 DACH2Q96NX9 599 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 MED18Q9BUE0 208 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 DKK4Q9UBT3 224 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 PCDHGA9Q9Y5G4 932 aaKnown RBP11.22□□□□□ -0.61
CACNB3-217ENST00000550483 KCNMB2Q9Y691 235 aa11.22□□□□□ -0.61
CACNB3-217ENST00000550483 USP9XQ93008 2570 aaPredicted RBP11.22□□□□□ -0.61
CACNB3-217ENST00000550483 METTL15A6NJ78 407 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 OR6C65A6NJZ3 312 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 H7C1C5 153 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 J3QLW9 94 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 GPR171O14626 319 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 TNFSF11O14788 317 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 OGG1O15527 345 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 EFSO43281 561 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 SELENOFO60613 162 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 ZNF254O75437 659 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 CLPXO76031 633 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 IL1AP01583 271 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 CTLA4P16410 223 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 ZNF19P17023 458 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 ZNF182P17025 639 aaPredicted RBP11.21□□□□□ -0.61
CACNB3-217ENST00000550483 CELP19835 753 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 ALOX5APP20292 161 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 EIF2S3P41091 472 aaKnown RBP11.21□□□□□ -0.61
CACNB3-217ENST00000550483 GUCA1AP43080 201 aaPredicted RBP11.21□□□□□ -0.61
CACNB3-217ENST00000550483 CRYBB2P43320 205 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 CD97P48960 835 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 ZNF133P52736 654 aaPredicted RBP11.21□□□□□ -0.61
CACNB3-217ENST00000550483 SUCLG1P53597 346 aaKnown RBP11.21□□□□□ -0.61
CACNB3-217ENST00000550483 VBP1P61758 197 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 NCS1P62166 190 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 LCN6P62502 163 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 PPIAP62937 165 aaKnown RBP11.21□□□□□ -0.61
CACNB3-217ENST00000550483 FOXK1P85037 733 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 DYNC1I2Q13409 638 aaKnown RBP11.21□□□□□ -0.61
CACNB3-217ENST00000550483 SLC17A1Q14916 467 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 HIST3H3Q16695 136 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 PCK2Q16822 640 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 DEFB109BQ30KR1 87 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 DEGS2Q6QHC5 323 aa11.21□□□□□ -0.61
CACNB3-217ENST00000550483 IGFL3Q6UXB1 125 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms