RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 CPT1CQ8TCG5 803 aa12.5□□□□□ -0.41
CACNB3-216ENST00000550391 SSC4DQ8WTU2 575 aa12.5□□□□□ -0.41
CACNB3-216ENST00000550391 GGHQ92820 318 aa12.5□□□□□ -0.41
CACNB3-216ENST00000550391 TMEM54Q969K7 222 aa12.5□□□□□ -0.41
CACNB3-216ENST00000550391 GMPPAQ96IJ6 420 aaPredicted RBP12.5□□□□□ -0.41
CACNB3-216ENST00000550391 TEAD3Q99594 435 aa12.5□□□□□ -0.41
CACNB3-216ENST00000550391 TM9SF2Q99805 663 aa12.5□□□□□ -0.41
CACNB3-216ENST00000550391 NUAK2Q9H093 628 aa12.5□□□□□ -0.41
CACNB3-216ENST00000550391 ZNF696Q9H7X3 374 aa12.5□□□□□ -0.41
CACNB3-216ENST00000550391 MRPS18AQ9NVS2 196 aaKnown RBP12.5□□□□□ -0.41
CACNB3-216ENST00000550391 CNOT2Q9NZN8 540 aaKnown RBP12.5□□□□□ -0.41
CACNB3-216ENST00000550391 CLEC4AQ9UMR7 237 aa12.5□□□□□ -0.41
CACNB3-216ENST00000550391 B9D1Q9UPM9 204 aa12.5□□□□□ -0.41
CACNB3-216ENST00000550391 FAM215AQ9Y5M1 114 aa12.5□□□□□ -0.41
CACNB3-216ENST00000550391 IRGMA1A4Y4 181 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 MBD3L4A6NDZ8 208 aaPredicted RBP12.49□□□□□ -0.41
CACNB3-216ENST00000550391 MBD3L3A6NE82 208 aaPredicted RBP12.49□□□□□ -0.41
CACNB3-216ENST00000550391 MBD3L5A6NJ08 208 aaPredicted RBP12.49□□□□□ -0.41
CACNB3-216ENST00000550391 OR6C65A6NJZ3 312 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 SLC16A7O60669 478 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 SS18L1O75177 396 aaPredicted RBP12.49□□□□□ -0.41
CACNB3-216ENST00000550391 KHDRBS3O75525 346 aaKnown RBP12.49□□□□□ -0.41
CACNB3-216ENST00000550391 GLCEO94923 617 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 GYPBP06028 91 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 EEF1B2P24534 225 aaKnown RBP12.49□□□□□ -0.41
CACNB3-216ENST00000550391 PYCR1P32322 319 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 SLC15A1P46059 708 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 CENPAP49450 140 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 BLVRAP53004 296 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 GABARAPL2P60520 117 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 DBPQ10586 325 aaPredicted RBP12.49□□□□□ -0.41
CACNB3-216ENST00000550391 GUSBP1Q15486 140 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 SEM1Q6ZVN7 128 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 C9orf106Q8NAJ2 232 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 ZNF540Q8NDQ6 660 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 ST6GALNAC3Q8NDV1 305 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 OR6N1Q8NGY5 312 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 MBD3L2Q8NHZ7 208 aaPredicted RBP12.49□□□□□ -0.41
CACNB3-216ENST00000550391 MYDGFQ969H8 173 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 NMD3Q96D46 503 aaKnown RBP12.49□□□□□ -0.41
CACNB3-216ENST00000550391 RNFT2Q96EX2 444 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 TSSK2Q96PF2 358 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 TP63Q9H3D4 680 aaPredicted RBP12.49□□□□□ -0.41
CACNB3-216ENST00000550391 DUSP21Q9H596 190 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 RERGLQ9H628 205 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 FKBP14Q9NWM8 211 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 HAO2Q9NYQ3 351 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 GLTPQ9NZD2 209 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 FOXD3Q9UJU5 478 aaPredicted RBP12.49□□□□□ -0.41
CACNB3-216ENST00000550391 MED12LQ86YW9 2145 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 ARHGAP21Q5T5U3 1957 aa12.49□□□□□ -0.41
CACNB3-216ENST00000550391 IGLV1-36A0A0B4J1U3 117 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 TRIM64A6NGJ6 449 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 DCTN6O00399 190 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 SLC19A2O60779 497 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 QDPRP09417 244 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 PIPP12273 146 aaPredicted RBP12.48□□□□□ -0.41
CACNB3-216ENST00000550391 CTLA4P16410 223 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 AGTR1P30556 359 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 GSTT1P30711 240 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 ZNF133P52736 654 aaPredicted RBP12.48□□□□□ -0.41
CACNB3-216ENST00000550391 SLC35A2P78381 396 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 RAB40BQ12829 278 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 LINC01590Q5TEZ4 76 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 LRFN4Q6PJG9 635 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 SLC25A47Q6Q0C1 308 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 AHSA2Q719I0 299 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 DOLPP1Q86YN1 238 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 OR51L1Q8NGJ5 315 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 OR6K6Q8NGW6 343 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 ZNRF4Q8WWF5 429 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 KISS1RQ969F8 398 aaPredicted RBP12.48□□□□□ -0.41
CACNB3-216ENST00000550391 MCHR2Q969V1 340 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 COPS4Q9BT78 406 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 RACGAP1Q9H0H5 632 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 CCNB1IP1Q9NPC3 277 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 B3GAT2Q9NPZ5 323 aa12.48□□□□□ -0.41
CACNB3-216ENST00000550391 ZGRF1Q86YA3 2104 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 IGKV1D-43A0A0B4J1Z2 117 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 FAM171A2A8MVW0 826 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 MRPS14O60783 128 aaKnown RBP12.47□□□□□ -0.41
CACNB3-216ENST00000550391 CRHP06850 196 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 TIMP3P35625 211 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 ATP6V1E1P36543 226 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 FMODQ06828 376 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 ST3GAL4Q11206 333 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 POU4F2Q12837 409 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 GGTLC2Q14390 218 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 PHYHD1Q5SRE7 291 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 RIPPLY2Q5TAB7 128 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 ZNF787Q6DD87 383 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 B3GLCTQ6Y288 498 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 B3GNT6Q6ZMB0 384 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 NUFIP2Q7Z417 695 aaKnown RBP12.47□□□□□ -0.41
CACNB3-216ENST00000550391 GPR137CQ8N3F9 429 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 STX19Q8N4C7 294 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 TSPAN14Q8NG11 270 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 APH1AQ96BI3 265 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 LGALS12Q96DT0 336 aa12.47□□□□□ -0.41
CACNB3-216ENST00000550391 ZMYND19Q96E35 227 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms