RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 HRKO00198 91 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 DVL2O14641 736 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 DNAJB6O75190 326 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 NME1P15531 152 aaKnown RBP14.84□□□□□ -0.03
CUX1-213ENST00000549414 GLB1P16278 677 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 SSR4P51571 173 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 CD300CQ08708 224 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 MALLQ13021 153 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 CDK5R1Q15078 307 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 PRSS53Q2L4Q9 553 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 SSX6Q7RTT6 188 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 KIAA0907Q7Z7F0 614 aaPredicted RBP14.84□□□□□ -0.03
CUX1-213ENST00000549414 ZAR1Q86SH2 424 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 OR2I1PQ8NGU4 316 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 KTI12Q96EK9 354 aaPredicted RBP14.84□□□□□ -0.03
CUX1-213ENST00000549414 OR2M2Q96R28 347 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 POM121CA8CG34 1229 aa14.83□□□□□ -0.03
CUX1-213ENST00000549414 SHISA8B8ZZ34 492 aa14.83□□□□□ -0.03
CUX1-213ENST00000549414 PRAF2O60831 178 aa14.83□□□□□ -0.03
CUX1-213ENST00000549414 IGHV3-9P01782 118 aa14.83□□□□□ -0.03
CUX1-213ENST00000549414 EVX1P49640 407 aa14.83□□□□□ -0.03
CUX1-213ENST00000549414 CBLN3Q6UW01 205 aa14.83□□□□□ -0.03
CUX1-213ENST00000549414 GSG1LQ6UXU4 331 aa14.83□□□□□ -0.03
CUX1-213ENST00000549414 MISPQ8IVT2 679 aa14.83□□□□□ -0.03
CUX1-213ENST00000549414 OR52I2Q8NH67 350 aa14.83□□□□□ -0.03
CUX1-213ENST00000549414 FCRL1Q96LA6 429 aa14.83□□□□□ -0.03
CUX1-213ENST00000549414 SPACA5Q96QH8 159 aa14.83□□□□□ -0.03
CUX1-213ENST00000549414 C7orf50Q9BRJ6 194 aaKnown RBP14.83□□□□□ -0.03
CUX1-213ENST00000549414 OTOFQ9HC10 1997 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 DBHP09172 617 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 PEBP1P30086 187 aaKnown RBP14.83□□□□□ -0.04
CUX1-213ENST00000549414 IL13RA1P78552 427 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 IDO2Q6ZQW0 420 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 CLCC1Q96S66 551 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 CDC6Q99741 560 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 CDCP1Q9H5V8 836 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 ACKR4Q9NPB9 350 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 B3GALT1Q9Y5Z6 326 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 IGKV1-8A0A0C4DH67 115 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 S100A6P06703 90 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 CD79BP40259 229 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 MAGEB1P43366 347 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 CCL11P51671 97 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 MVDP53602 400 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 EMP3P54852 163 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 DLX5P56178 289 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 SLC36A2Q495M3 483 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 MRM1Q6IN84 353 aaKnown RBP14.83□□□□□ -0.04
CUX1-213ENST00000549414 ZNF767PQ75MW2 155 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 RNF170Q96K19 258 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 RABL2AQ9UBK7 228 aaPredicted RBP14.83□□□□□ -0.04
CUX1-213ENST00000549414 OR52A1Q9UKL2 312 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 RABL2BQ9UNT1 228 aa14.83□□□□□ -0.04
CUX1-213ENST00000549414 A0A0B4J2E0 115 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 A0A1B0GX12 115 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 TNFRSF10AO00220 468 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 PIAS2O75928 621 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 OR2J2O76002 312 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 EVI2BP34910 448 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 CRYBB2P43320 205 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 RPS19BP1Q86WX3 136 aaKnown RBP14.82□□□□□ -0.04
CUX1-213ENST00000549414 SMIM19Q96E16 107 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 SEC22AQ96IW7 307 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 SRRQ9GZT4 340 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 SLA2Q9H6Q3 261 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 ROS1P08922 2347 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 CBX7O95931 251 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 HLA-AP01891 365 aaKnown RBP14.82□□□□□ -0.04
CUX1-213ENST00000549414 RAB2AP61019 212 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 FOXK1P85037 733 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 TNK1Q13470 666 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 GREB1Q4ZG55 1949 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 PHB2Q99623 299 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 GPA33Q99795 319 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 REV1Q9UBZ9 1251 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 KCNS2Q9ULS6 477 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 DSCR3O14972 297 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 SLC43A1O75387 559 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 SIX6O95475 246 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 MT-ATP6P00846 226 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 ZGLP1P0C6A0 271 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 BDKRB2P30411 391 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 TAS2R19P59542 299 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 OR10K2Q6IF99 312 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 MFSD4AQ8N468 514 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 SORCS2Q96PQ0 1159 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 A0A0A6YYH2 397 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 A6NJ64 397 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 SCGNO76038 276 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 SLC26A5P58743 744 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 MRPL49Q13405 166 aaKnown RBP14.82□□□□□ -0.04
CUX1-213ENST00000549414 TRAPPC6BQ86SZ2 158 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 C12orf45Q8N5I9 185 aaPredicted RBP14.82□□□□□ -0.04
CUX1-213ENST00000549414 KIAA1958Q8N8K9 716 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 PIGCQ92535 297 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 MIB2Q96AX9 1013 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 CDX2Q99626 313 aaPredicted RBP14.82□□□□□ -0.04
CUX1-213ENST00000549414 OR10A2Q9H208 303 aa14.82□□□□□ -0.04
CUX1-213ENST00000549414 CENPVL1A0A0U1RR11 272 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 B4DXG7 233 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms