RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 KLK3P07288 261 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 TBPP20226 339 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 AHCYP23526 432 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 P2RY6Q15077 328 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 SYPL1Q16563 259 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 CEP78Q5JTW2 689 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 DCST1Q5T197 706 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 HES3Q5TGS1 186 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 SLC27A4Q6P1M0 643 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 TRAT1Q6PIZ9 186 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 CREB3L2Q70SY1 520 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 LRRC75A-AS1Q8N1F1 130 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF366Q8N895 744 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 PXT1Q8NFP0 134 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 FAM57AQ8TBR7 257 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 PROX1Q92786 737 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 PKIBQ9C010 78 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 ZCCHC3Q9NUD5 404 aaKnown RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 FAM206AQ9NX38 181 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 ERVK13-1Q9NX77 482 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 NUFIP1Q9UHK0 495 aaKnown RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 LRP12Q9Y561 859 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 VGLL3A8MV65 326 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 A8MXK9 166 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 TNFRSF11BO00300 401 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 SYNGR3O43761 229 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 FAM20BO75063 409 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 CRCPO75575 148 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 GADD45GO95257 159 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 ANP32DO95626 131 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 GASTP01350 101 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 SNRNP70P08621 437 aaKnown RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 PSMB1P20618 241 aaKnown RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 ACHEP22303 614 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 CRYBB2P43320 205 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF85Q03923 595 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 MED22Q15528 200 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 CD226Q15762 336 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 DEFB133Q30KQ1 61 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 C1orf146Q5VVC0 180 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 STEAP3Q658P3 488 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 OLFML2AQ68BL7 652 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 WDR73Q6P4I2 378 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 TTC33Q6PID6 262 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 DNM1P34Q6PK57 102 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 LINC00346Q8IVM7 164 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 TMEFF1Q8IYR6 380 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 GPR135Q8IZ08 494 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 KIF2BQ8N4N8 673 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 TMEM178AQ8NBL3 297 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 OR2T33Q8NG76 320 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF524Q96C55 264 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 DGCR14Q96DF8 476 aaKnown RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 GPA33Q99795 319 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 THTPAQ9BU02 230 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 CCDC32Q9BV29 185 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 PCDHB16Q9NRJ7 776 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 SH3BGRL2Q9UJC5 107 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 MYRFQ9Y2G1 1151 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 MED31Q9Y3C7 131 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 ARHGEF17Q96PE2 2063 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 CHD7Q9P2D1 2997 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 KLK10O43240 276 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 UBBP0CG47 229 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 UBCP0CG48 685 aaKnown RBP4.3□□□□□ -1.72
SCAF11-212ENST00000549162 OR12D1P0DN82 309 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ALOX5APP20292 161 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 MAKP20794 623 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 LIPAP38571 399 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF41P51814 821 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-212ENST00000549162 LASP1Q14847 261 aaKnown RBP4.3□□□□□ -1.72
SCAF11-212ENST00000549162 EXOC3L2Q2M3D2 409 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 GTDC1Q4AE62 458 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 SLC18B1Q6NT16 456 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 TMEM107Q6UX40 140 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 TTLL10Q6ZVT0 673 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 C8orf59Q8N0T1 100 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-212ENST00000549162 DHRSXQ8N5I4 330 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 MS4A15Q8N5U1 240 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 SLC37A3Q8NCC5 494 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 C14orf79Q96F83 325 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 MED30Q96HR3 178 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 COMMD4Q9H0A8 199 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 CXXC4Q9H2H0 198 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 TMEM27Q9HBJ8 222 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ATP13A2Q9NQ11 1180 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 SLC22A13Q9Y226 551 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 CROCCQ5TZA2 2017 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 PPIAL4EA0A075B759 164 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 TMED7-TICAM2A0A0A6YYA0 188 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 TRAV17A0A0B4J275 112 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 PPIAL4CA0A0B4J2A2 164 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 A0A0U1RQK1 487 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF320A2RRD8 509 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 CDC14CA4D256 554 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 PPIAL4DF5H284 164 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 CSN2P05814 226 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 PPIAL4FP0DN26 164 aa4.3□□□□□ -1.72
SCAF11-212ENST00000549162 HK1P19367 917 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms