RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 PTH2RP49190 550 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 C17orf67Q0P5P2 114 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 RASGEF1BQ0VAM2 473 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 MAB21L1Q13394 359 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 SNTB2Q13425 540 aaKnown RBP16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 DYRK1AQ13627 763 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 NR0B2Q15466 257 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 FCN2Q15485 313 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 HSPB2Q16082 182 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 PAPD4Q6PIY7 484 aaKnown RBP16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 OR52I2Q8NH67 350 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 NUBPLQ8TB37 319 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 HGDQ93099 445 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 C8orf44Q96CB5 159 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 DUSP23Q9BVJ7 150 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 MED11Q9P086 117 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 HRH3Q9Y5N1 445 aa16.67■□□□□ 0.26
PRPF40B-208ENST00000548436 TRBV11-1A0A0K0K1C0 115 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 FAM47E-STBD1D6RA91 191 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 H0YC42 278 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 MS4A18H0YCH9 400 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 SIGLEC6O43699 453 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 WNT11O96014 354 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 PNPP00491 289 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 RAF1P04049 648 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 MS4A18Q3C1V0 323 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 FDX2Q6P4F2 183 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 ARSKQ6UWY0 536 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 TMPRSS12Q86WS5 348 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 ZNF679Q8IYX0 411 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 SAP25Q8TEE9 199 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 PPP1R14AQ96A00 147 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 S100A16Q96FQ6 103 aaKnown RBP16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 C7orf50Q9BRJ6 194 aaKnown RBP16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 NIPAL2Q9H841 368 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 PLEKHA1Q9HB21 404 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 RABL2AQ9UBK7 228 aaPredicted RBP16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 PPIEQ9UNP9 301 aaKnown RBP16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 RABL2BQ9UNT1 228 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 ADAM8P78325 824 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 DCDP81605 110 aaKnown RBP16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 PLA2G7Q13093 441 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 FAM205BPQ63HN1 556 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 SLC22A10Q63ZE4 541 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 ZNF385CQ66K41 422 aaPredicted RBP16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 SLC18B1Q6NT16 456 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 C5orf46Q6UWT4 87 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 WDFY1Q8IWB7 410 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 ZFAND1Q8TCF1 268 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 ASB17Q8WXJ9 295 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 ST8SIA1Q92185 356 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 MCHR2Q969V1 340 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 MRI1Q9BV20 369 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 COPZ2Q9P299 210 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 RARRES3Q9UL19 164 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 SLC22A13Q9Y226 551 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 VDAC3Q9Y277 283 aa16.66■□□□□ 0.26
PRPF40B-208ENST00000548436 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 ANXA2P2A6NMY6 339 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 GABARAPH6UMI1 98 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 GPR171O14626 319 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 MPZL1O95297 269 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 ANXA2P07355 339 aaKnown RBP16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 PTHLHP12272 177 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 CSRP1P21291 193 aaKnown RBP16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 CDK2P24941 298 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 EMP2P54851 167 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 TNK1Q13470 666 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 TEX30Q5JUR7 227 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 LCN10Q6JVE6 187 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 MDGA2Q7Z553 956 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 RNF128Q8TEB7 428 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 MIB2Q96AX9 1013 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 HAVCR1Q96D42 359 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 NXPE2Q96DL1 559 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 MED28Q9H204 178 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 RCE1Q9Y256 329 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 COA3Q9Y2R0 106 aaPredicted RBP16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 GMDSO60547 372 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 RAD1O60671 282 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 RAB40ALP0C0E4 278 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 TMIGD3P0DMS9 266 aaPredicted RBP16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 ART1P52961 327 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 BLVRAP53004 296 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 PUDPQ08623 228 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 OR7A5Q15622 319 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 TMEM255AQ5JRV8 349 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 BTN2A1Q7KYR7 527 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 OR11H7Q8NGC8 314 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 RAB40AQ8WXH6 277 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 CCDC74BQ96LY2 380 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 SLA2Q9H6Q3 261 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 APMAPQ9HDC9 416 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 KLK11Q9UBX7 282 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 ETV7Q9Y603 341 aa16.65■□□□□ 0.26
PRPF40B-208ENST00000548436 WDFY3Q8IZQ1 3526 aa16.64■□□□□ 0.25
PRPF40B-208ENST00000548436 VSTM2BA6NLU5 285 aa16.64■□□□□ 0.25
PRPF40B-208ENST00000548436 SHISA8B8ZZ34 492 aa16.64■□□□□ 0.25
PRPF40B-208ENST00000548436 CCR9P51686 369 aa16.64■□□□□ 0.25
PRPF40B-208ENST00000548436 ROM1Q03395 351 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms