RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 ZNF771Q7L3S4 317 aaPredicted RBP12.97□□□□□ -0.33
SNX29P1-201ENST00000548357 NANOGNBQ7Z5D8 188 aa12.97□□□□□ -0.33
SNX29P1-201ENST00000548357 LRRC18Q8N456 261 aa12.97□□□□□ -0.33
SNX29P1-201ENST00000548357 CLDN22Q8N7P3 220 aa12.97□□□□□ -0.33
SNX29P1-201ENST00000548357 ICA1LQ8NDH6 482 aa12.97□□□□□ -0.33
SNX29P1-201ENST00000548357 NABP1Q96AH0 204 aa12.97□□□□□ -0.33
SNX29P1-201ENST00000548357 NMD3Q96D46 503 aaKnown RBP12.97□□□□□ -0.33
SNX29P1-201ENST00000548357 SEPHS2Q99611 448 aa12.97□□□□□ -0.33
SNX29P1-201ENST00000548357 MRPL13Q9BYD1 178 aaKnown RBP12.97□□□□□ -0.33
SNX29P1-201ENST00000548357 OCEL1Q9H607 264 aa12.97□□□□□ -0.33
SNX29P1-201ENST00000548357 DENND2DQ9H6A0 471 aaPredicted RBP12.97□□□□□ -0.33
SNX29P1-201ENST00000548357 G6PC2Q9NQR9 355 aa12.97□□□□□ -0.33
SNX29P1-201ENST00000548357 NDUFAF1Q9Y375 327 aa12.97□□□□□ -0.33
SNX29P1-201ENST00000548357 UGT2A1Q9Y4X1 527 aa12.97□□□□□ -0.33
SNX29P1-201ENST00000548357 LOC105371242A0A075B767 164 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 C17orf100A8MU93 164 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 BLOC1S5-TXNDC5H3BN57 136 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 FXYD1O00168 92 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 MGRN1O60291 552 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 DEAF1O75398 565 aaPredicted RBP12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 LCKP06239 509 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 MPV17P39210 176 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 AQP2P41181 271 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 WNT5AP41221 380 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 CLRN1P58418 232 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 SPATA46Q5T0L3 261 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 SLC16A14Q7RTX9 510 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 SNX32Q86XE0 403 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 ZNF101Q8IZC7 436 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 HDAC2Q92769 488 aaKnown RBP12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 EVA1AQ9H8M9 152 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 RNF121Q9H920 327 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 CDH20Q9HBT6 801 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 HINT3Q9NQE9 182 aaKnown RBP12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 METRNQ9UJH8 293 aa12.96□□□□□ -0.33
SNX29P1-201ENST00000548357 CMYA5Q8N3K9 4069 aa12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 ANGPT2O15123 496 aa12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 OR7A10O76100 309 aa12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 BCL10O95999 233 aa12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 IGHG1P01857 330 aa12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 TFP02787 698 aa12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 CFPP27918 469 aa12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 ZNF133P52736 654 aaPredicted RBP12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 KLF3P57682 345 aaPredicted RBP12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 TSTQ16762 297 aaKnown RBP12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 VMACQ2NL98 169 aa12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 PABPC1L2AQ5JQF8 200 aa12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 TMEM53Q6P2H8 277 aa12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 PATL1Q86TB9 770 aaKnown RBP12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 RBM15BQ8NDT2 890 aaKnown RBP12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 AKR7LQ8NHP1 331 aa12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 SYNPRQ8TBG9 265 aa12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 ZNF665Q9H7R5 613 aa12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 NPHS2Q9NP85 383 aa12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 GMPR2Q9P2T1 348 aaKnown RBP12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 ZNF346Q9UL40 294 aaKnown RBP12.95□□□□□ -0.34
SNX29P1-201ENST00000548357 LOC100509620A0A075B734 347 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 SNAP29O95721 258 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 MT-ND1P03886 318 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 TSPAN19P0C672 248 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 ACADSP16219 412 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 ZNF32P17041 273 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 MAKP20794 623 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 OR1E2P47887 323 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 UCP2P55851 309 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 TMEM33P57088 247 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 MRPS11P82912 194 aaKnown RBP12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 PIN1Q13526 163 aaPredicted RBP12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 C10orf128Q5T292 105 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 ARMC4Q5T2S8 1044 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 NANOGP8Q6NSW7 305 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 RFPL4BQ6ZWI9 263 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 USP51Q70EK9 711 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 CCDC80Q76M96 950 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 CALHM3Q86XJ0 350 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 OR51F2Q8NH61 342 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 ZNF519Q8TB69 540 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 DYDC1Q8WWB3 177 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 IPCEF1Q8WWN9 437 aaPredicted RBP12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 NSMAFQ92636 917 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 MPP4Q96JB8 637 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 ZNF416Q9BWM5 594 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 TMPRSS13Q9BYE2 586 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 SLC19A3Q9BZV2 496 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 NANOGQ9H9S0 305 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 DCAF16Q9NXF7 216 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 FBXL3Q9UKT7 428 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 SH3GLB1Q9Y371 365 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 WIPI2Q9Y4P8 454 aa12.94□□□□□ -0.34
SNX29P1-201ENST00000548357 TRRAPQ9Y4A5 3859 aa12.93□□□□□ -0.34
SNX29P1-201ENST00000548357 MEGF8Q7Z7M0 2845 aa12.93□□□□□ -0.34
SNX29P1-201ENST00000548357 ZSCAN5BA6NJL1 495 aa12.93□□□□□ -0.34
SNX29P1-201ENST00000548357 PLPP2O43688 288 aa12.93□□□□□ -0.34
SNX29P1-201ENST00000548357 FARS2O95363 451 aaKnown RBP12.93□□□□□ -0.34
SNX29P1-201ENST00000548357 ADRA2CP18825 462 aa12.93□□□□□ -0.34
SNX29P1-201ENST00000548357 LSP1P33241 339 aa12.93□□□□□ -0.34
SNX29P1-201ENST00000548357 SF3A3Q12874 501 aaKnown RBP eCLIP12.93□□□□□ -0.34
SNX29P1-201ENST00000548357 LAPTM4AQ15012 233 aa12.93□□□□□ -0.34
SNX29P1-201ENST00000548357 TBC1D28Q2M2D7 210 aa12.93□□□□□ -0.34
SNX29P1-201ENST00000548357 SLC36A2Q495M3 483 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms