RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 EDARQ9UNE0 448 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 BAIAP2Q9UQB8 552 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 TEX13CA0A0J9YWL9 993 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 A0A1W2PR80 420 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 BHLHE40O14503 412 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 FARS2O95363 451 aaKnown RBP12.63□□□□□ -0.39
DDX54-203ENST00000546869 IGLV1-44P01699 117 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 CD3EP07766 207 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 BSPH1Q075Z2 132 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 CD47Q08722 323 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 KRR1Q13601 381 aaKnown RBP12.63□□□□□ -0.39
DDX54-203ENST00000546869 FAM27BQ5VT28 67 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 FBXW10Q5XX13 1052 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 LNX2Q8N448 690 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 NANOS1Q8WY41 292 aaKnown RBP12.63□□□□□ -0.39
DDX54-203ENST00000546869 GTPBP3Q969Y2 492 aaKnown RBP12.63□□□□□ -0.39
DDX54-203ENST00000546869 CENPNQ96H22 339 aaPredicted RBP12.63□□□□□ -0.39
DDX54-203ENST00000546869 HS3ST6Q96QI5 342 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 WACQ9BTA9 647 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 EGLN3Q9H6Z9 239 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 ZNF556Q9HAH1 456 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 ZNF224Q9NZL3 707 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 FBXL3Q9UKT7 428 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 UGT2A1Q9Y4X1 527 aa12.63□□□□□ -0.39
DDX54-203ENST00000546869 ITPR2Q14571 2701 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 IGKV1D-43A0A0B4J1Z2 117 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 A0A1W2PPR1 153 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 UBL3O95164 117 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 SLC2A10O95528 541 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 PPP1R3DO95685 299 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 B4GALT1P15291 398 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 CD40P25942 277 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 CDKN2AP42771 156 aaKnown RBP12.62□□□□□ -0.39
DDX54-203ENST00000546869 MYBPC1Q00872 1141 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 FMODQ06828 376 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 ZSCAN26Q16670 478 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 FAHD1Q6P587 224 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 SKA3Q8IX90 412 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 SVOPLQ8N434 492 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 IL17RDQ8NFM7 739 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 LRTOMTQ8WZ04 291 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 ZNF75AQ96N20 296 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 SLC38A2Q96QD8 506 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 OSBPL10Q9BXB5 764 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 PLA2G12AQ9BZM1 189 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 RNF115Q9Y4L5 304 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 APCP25054 2843 aa12.62□□□□□ -0.39
DDX54-203ENST00000546869 FBN2P35556 2912 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 DCHS2Q6V1P9 2916 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 CYSRT1A8MQ03 144 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 G3V2T6 193 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 H3BNX3 289 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 SOCS2O14508 198 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 OSMP13725 252 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 HIST1H1CP16403 213 aaKnown RBP12.61□□□□□ -0.39
DDX54-203ENST00000546869 PRKACGP22612 351 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 NOS3P29474 1203 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 CRABP1P29762 137 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 GUCA1AP43080 201 aaPredicted RBP12.61□□□□□ -0.39
DDX54-203ENST00000546869 ZNF83P51522 516 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 GSG1Q2KHT4 349 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 SLC36A2Q495M3 483 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 ZNF362Q5T0B9 420 aaPredicted RBP12.61□□□□□ -0.39
DDX54-203ENST00000546869 ALKBH2Q6NS38 261 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 ZNF704Q6ZNC4 412 aaPredicted RBP12.61□□□□□ -0.39
DDX54-203ENST00000546869 PTCHD4Q6ZW05 846 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 ZDHHC13Q8IUH4 622 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 HS3ST5Q8IZT8 346 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 PARP8Q8N3A8 854 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 OR2T33Q8NG76 320 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 OR8D4Q8NGM9 314 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 NINJ1Q92982 152 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 NABP1Q96AH0 204 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 RASD2Q96D21 266 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 DDOQ99489 341 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 TSSK6Q9BXA6 273 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 GABARAPL1Q9H0R8 117 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 SYT4Q9H2B2 425 aa12.61□□□□□ -0.39
DDX54-203ENST00000546869 IGHV1-18A0A0C4DH31 117 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 ZNF503-AS2A6NEH8 195 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 SHISA9B4DS77 424 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 M0R1B8 84 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 KHDRBS3O75525 346 aaKnown RBP12.6□□□□□ -0.39
DDX54-203ENST00000546869 SEC14L2O76054 403 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 HLA-HP01893 362 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 GIPRP48546 466 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 PTDSS1P48651 473 aaKnown RBP12.6□□□□□ -0.39
DDX54-203ENST00000546869 RAB1AP62820 205 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 KCNMB1Q16558 191 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 SLC36A3Q495N2 470 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 CLEC12AQ5QGZ9 265 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 DNM1P34Q6PK57 102 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 SYT9Q86SS6 491 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 ZBTB46Q86UZ6 589 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 JAZF1Q86VZ6 243 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 DEPDC4Q8N2C3 294 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 ATG16L2Q8NAA4 619 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 NPEPL1Q8NDH3 523 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 LILRB1Q8NHL6 650 aaPredicted RBP12.6□□□□□ -0.39
DDX54-203ENST00000546869 PYDC1Q8WXC3 89 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms