RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ZIC4Q8N9L1 334 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 ATG16L2Q8NAA4 619 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 ICA1LQ8NDH6 482 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 OR52L1Q8NGH7 329 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 OR5K1Q8NHB7 308 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 GNPDA2Q8TDQ7 276 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 DNAJC9Q8WXX5 260 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 APH1AQ96BI3 265 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 STARD4Q96DR4 205 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 NRBF2Q96F24 287 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 CENPNQ96H22 339 aaPredicted RBP5.59□□□□□ -1.51
PRKDC-211ENST00000546304 GPX7Q96SL4 187 aaPredicted RBP5.59□□□□□ -1.51
PRKDC-211ENST00000546304 FEVQ99581 238 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 PKP2Q99959 881 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 KATNB1Q9BVA0 655 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 DGCR6LQ9BY27 220 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 POLDIP3Q9BY77 421 aaKnown RBP5.59□□□□□ -1.51
PRKDC-211ENST00000546304 GABARAPL1Q9H0R8 117 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 OPN3Q9H1Y3 402 aaPredicted RBP5.59□□□□□ -1.51
PRKDC-211ENST00000546304 SEMA6AQ9H2E6 1030 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 OR52D1Q9H346 318 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 INIPQ9NRY2 104 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 TBC1D23Q9NUY8 699 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 MED29Q9NX70 200 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 TAS2R5Q9NYW4 299 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 PDP1Q9P0J1 537 aaPredicted RBP5.59□□□□□ -1.51
PRKDC-211ENST00000546304 MALT1Q9UDY8 824 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 MGAT4BQ9UQ53 548 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 MAGED1Q9Y5V3 778 aaPredicted RBP5.59□□□□□ -1.51
PRKDC-211ENST00000546304 CADP27708 2225 aa5.59□□□□□ -1.52
PRKDC-211ENST00000546304 ROS1P08922 2347 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 NKX2-6A6NCS4 301 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 WIPF3A6NGB9 483 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 G3V2T6 193 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 MS4A18H0YCH9 400 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 H0YHG0 523 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 SLC43A1O75387 559 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF432O94892 652 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 CGAP01215 116 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 GASTP01350 101 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 IGHV3-9P01782 118 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 IGHG1P01857 330 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 CD14P08571 375 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 ANXA8P13928 327 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 COX5AP20674 150 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 SLC6A6P31641 620 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 SELENOPP49908 381 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 BIDP55957 195 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 ELF3P78545 371 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-211ENST00000546304 TFF3Q07654 80 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 KRR1Q13601 381 aaKnown RBP5.58□□□□□ -1.52
PRKDC-211ENST00000546304 ACKR1Q16570 336 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 MS4A18Q3C1V0 323 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 FBXL19-AS1Q494R0 122 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 SLC36A3Q495N2 470 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 CLEC12AQ5QGZ9 265 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 CARD17Q5XLA6 110 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 FAM205BPQ63HN1 556 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 NIPAL3Q6P499 406 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 FAHD1Q6P587 224 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 KLHL17Q6TDP4 642 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 CD300LDQ6UXZ3 194 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 Q6ZT83 130 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 RASSF6Q6ZTQ3 369 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 SLC35D2Q76EJ3 337 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 KIF18BQ86Y91 864 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF100Q8IYN0 542 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 TMEM123Q8N131 208 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 CLDN22Q8N7P3 220 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 LRRC75AQ8NAA5 344 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 NOXO1Q8NFA2 376 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 OR8D4Q8NGM9 314 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 LILRB4Q8NHJ6 448 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF519Q8TB69 540 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 TEX47Q8TBZ9 253 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 MAGEE2Q8TD90 523 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-211ENST00000546304 ASB10Q8WXI3 467 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 ADAD1Q96M93 576 aaKnown RBP5.58□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF570Q96NI8 536 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 TSPAN32Q96QS1 320 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 OR2M2Q96R28 347 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 TNFRSF13CQ96RJ3 184 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 NIPSNAP1Q9BPW8 284 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 EMC6Q9BV81 110 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 RBM24Q9BX46 236 aaKnown RBP5.58□□□□□ -1.52
PRKDC-211ENST00000546304 PLA2G12AQ9BZM1 189 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 UCK2Q9BZX2 261 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 SLCO5A1Q9H2Y9 848 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 EGLN3Q9H6Z9 239 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF556Q9HAH1 456 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 PAPOLBQ9NRJ5 636 aaKnown RBP5.58□□□□□ -1.52
PRKDC-211ENST00000546304 PARPBPQ9NWS1 579 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 GALNT8Q9NY28 637 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 JKAMPQ9P055 326 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 STX18Q9P2W9 335 aaKnown RBP5.58□□□□□ -1.52
PRKDC-211ENST00000546304 IL20RAQ9UHF4 553 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 PRSS50Q9UI38 385 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 ADAM18Q9Y3Q7 739 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 AKAP6Q13023 2319 aa5.58□□□□□ -1.52
PRKDC-211ENST00000546304 TRAV20A0A0B4J274 112 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms