RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PTCHD4Q6ZW05 846 aa17.92■□□□□ 0.46
HMGA2-211ENST00000545998 DNAJC9Q8WXX5 260 aa17.92■□□□□ 0.46
HMGA2-211ENST00000545998 TSSK6Q9BXA6 273 aa17.92■□□□□ 0.46
HMGA2-211ENST00000545998 VSX1Q9NZR4 365 aaPredicted RBP17.92■□□□□ 0.46
HMGA2-211ENST00000545998 KIF17Q9P2E2 1029 aa17.92■□□□□ 0.46
HMGA2-211ENST00000545998 OAZ3Q9UMX2 235 aa17.92■□□□□ 0.46
HMGA2-211ENST00000545998 ROS1P08922 2347 aa17.92■□□□□ 0.46
HMGA2-211ENST00000545998 ARPC4-TTLL3A0A0A6YYG9 625 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 DEFB108AA8MXU0 73 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 GOSR1O95249 250 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 HOXB1P14653 301 aaPredicted RBP17.91■□□□□ 0.46
HMGA2-211ENST00000545998 HIST1H1CP16403 213 aaKnown RBP17.91■□□□□ 0.46
HMGA2-211ENST00000545998 SSTR2P30874 369 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 CDKN2AP42771 156 aaKnown RBP17.91■□□□□ 0.46
HMGA2-211ENST00000545998 ZNF813Q6ZN06 617 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 OBP2BQ9NPH6 170 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 CTAG2O75638 210 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 OSMP13725 252 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 B4GALT1P15291 398 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 NOS3P29474 1203 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 ZNF84P51523 738 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 TLE4Q04727 773 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 KLHL24Q6TFL4 600 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 LNX2Q8N448 690 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 ICA1LQ8NDH6 482 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 OR2T33Q8NG76 320 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 OR4Q3Q8NH05 313 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 STMN2Q93045 179 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 PAPOLBQ9NRJ5 636 aaKnown RBP17.91■□□□□ 0.46
HMGA2-211ENST00000545998 TMEM38BQ9NVV0 291 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 NPAP1Q9NZP6 1156 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 UGT2A1Q9Y4X1 527 aa17.91■□□□□ 0.46
HMGA2-211ENST00000545998 HEATR1Q9H583 2144 aaKnown RBP17.9■□□□□ 0.46
HMGA2-211ENST00000545998 H3BN98 237 aa17.9■□□□□ 0.46
HMGA2-211ENST00000545998 HRGP04196 525 aa17.9■□□□□ 0.46
HMGA2-211ENST00000545998 SLC35F1Q5T1Q4 408 aa17.9■□□□□ 0.46
HMGA2-211ENST00000545998 KDM4DQ6B0I6 523 aa17.9■□□□□ 0.46
HMGA2-211ENST00000545998 SLC22A24Q8N4F4 322 aa17.9■□□□□ 0.46
HMGA2-211ENST00000545998 OR4K13Q8NH42 304 aa17.9■□□□□ 0.46
HMGA2-211ENST00000545998 TEX47Q8TBZ9 253 aa17.9■□□□□ 0.46
HMGA2-211ENST00000545998 NSMAFQ92636 917 aa17.9■□□□□ 0.46
HMGA2-211ENST00000545998 SNX18Q96RF0 628 aa17.9■□□□□ 0.46
HMGA2-211ENST00000545998 SYT4Q9H2B2 425 aa17.9■□□□□ 0.46
HMGA2-211ENST00000545998 NGBQ9NPG2 151 aa17.9■□□□□ 0.46
HMGA2-211ENST00000545998 BAIAP2Q9UQB8 552 aa17.9■□□□□ 0.46
HMGA2-211ENST00000545998 SPG11Q96JI7 2443 aa17.89■□□□□ 0.45
HMGA2-211ENST00000545998 ZNF503-AS2A6NEH8 195 aa17.89■□□□□ 0.45
HMGA2-211ENST00000545998 SAC3D1A6NKF1 404 aa17.89■□□□□ 0.45
HMGA2-211ENST00000545998 WNT11O96014 354 aa17.89■□□□□ 0.45
HMGA2-211ENST00000545998 LOXP28300 417 aaPredicted RBP17.89■□□□□ 0.45
HMGA2-211ENST00000545998 UBE2NP61088 152 aaKnown RBP17.89■□□□□ 0.45
HMGA2-211ENST00000545998 NRN1LQ496H8 165 aa17.89■□□□□ 0.45
HMGA2-211ENST00000545998 BEX5Q5H9J7 111 aa17.89■□□□□ 0.45
HMGA2-211ENST00000545998 ZNF362Q5T0B9 420 aaPredicted RBP17.89■□□□□ 0.45
HMGA2-211ENST00000545998 LEG1Q6P5S2 330 aa17.89■□□□□ 0.45
HMGA2-211ENST00000545998 JAZF1Q86VZ6 243 aa17.89■□□□□ 0.45
HMGA2-211ENST00000545998 CCDC36Q8IYA8 594 aa17.89■□□□□ 0.45
HMGA2-211ENST00000545998 PARP8Q8N3A8 854 aa17.89■□□□□ 0.45
HMGA2-211ENST00000545998 NMNAT3Q96T66 252 aa17.89■□□□□ 0.45
HMGA2-211ENST00000545998 RASSF1Q9NS23 344 aa17.89■□□□□ 0.45
HMGA2-211ENST00000545998 AKAP6Q13023 2319 aa17.89■□□□□ 0.45
HMGA2-211ENST00000545998 POLQO75417 2590 aa17.89■□□□□ 0.45
HMGA2-211ENST00000545998 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.88■□□□□ 0.45
HMGA2-211ENST00000545998 CTLA4P16410 223 aa17.88■□□□□ 0.45
HMGA2-211ENST00000545998 POU1F1P28069 291 aa17.88■□□□□ 0.45
HMGA2-211ENST00000545998 CDAP32320 146 aa17.88■□□□□ 0.45
HMGA2-211ENST00000545998 TUBA1BP68363 451 aa17.88■□□□□ 0.45
HMGA2-211ENST00000545998 TUBA4AP68366 448 aa17.88■□□□□ 0.45
HMGA2-211ENST00000545998 MRPS34P82930 218 aaKnown RBP17.88■□□□□ 0.45
HMGA2-211ENST00000545998 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.88■□□□□ 0.45
HMGA2-211ENST00000545998 TUBA1AQ71U36 451 aa17.88■□□□□ 0.45
HMGA2-211ENST00000545998 PQLC1Q8N2U9 271 aa17.88■□□□□ 0.45
HMGA2-211ENST00000545998 OR52E2Q8NGJ4 325 aa17.88■□□□□ 0.45
HMGA2-211ENST00000545998 HTRA1Q92743 480 aa17.88■□□□□ 0.45
HMGA2-211ENST00000545998 KRT84Q9NSB2 600 aa17.88■□□□□ 0.45
HMGA2-211ENST00000545998 ZNF224Q9NZL3 707 aa17.88■□□□□ 0.45
HMGA2-211ENST00000545998 NOTCH2Q04721 2471 aa17.88■□□□□ 0.45
HMGA2-211ENST00000545998 OR8G3PP0DMU2 310 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 PPP2R2BQ00005 443 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 ETFDHQ16134 617 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 PGGHGQ32M88 737 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 FOXL2NBQ6ZUU3 175 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 IQCF1Q8N6M8 205 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 NPEPL1Q8NDH3 523 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 SDR9C7Q8NEX9 313 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 NABP1Q96AH0 204 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 PIK3IP1Q96FE7 263 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 PLPPR2Q96GM1 343 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 DDOQ99489 341 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 C1QTNF6Q9BXI9 259 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 NUAK2Q9H093 628 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 B3GNT2Q9NY97 397 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 TMEFF2Q9UIK5 374 aaPredicted RBP17.87■□□□□ 0.45
HMGA2-211ENST00000545998 PLCE1Q9P212 2302 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 OR6C68A6NDL8 312 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 SLC16A7O60669 478 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 RENP00797 406 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 NPR2P20594 1047 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 PAX7P23759 505 aa17.87■□□□□ 0.45
HMGA2-211ENST00000545998 GIPRP48546 466 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms