RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 MIB2Q96AX9 1013 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 PHF3Q92576 2039 aaKnown RBP13.6□□□□□ -0.23
USP28-214ENST00000545540 LINC00862A6NCI5 91 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 OR6A2O95222 327 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 IGF2P01344 180 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 TACSTD2P09758 323 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 ARHGEF39Q8N4T4 335 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 OR4S1Q8NGB4 309 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 FAM131CQ96AQ9 280 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 GSX2Q9BZM3 304 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 NPDC1Q9NQX5 325 aaPredicted RBP13.6□□□□□ -0.23
USP28-214ENST00000545540 UBQLN4Q9NRR5 601 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 CCSO14618 274 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 ABHD16AO95870 558 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 CLPSP04118 112 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 POU2F2P09086 479 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 ALOX5APP20292 161 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 NFYAP23511 347 aaPredicted RBP13.6□□□□□ -0.23
USP28-214ENST00000545540 CXCR1P25024 350 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 FMODQ06828 376 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 PRTGQ2VWP7 1150 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 SCGB2B2Q4G0G5 96 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 FAM74A1Q5RGS3 127 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 LRFN4Q6PJG9 635 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 C3P1Q6ZMU1 363 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 METTL21AQ8WXB1 218 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 CMBLQ96DG6 245 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 ACTR6Q9GZN1 396 aa13.6□□□□□ -0.23
USP28-214ENST00000545540 DUSP15Q9H1R2 295 aaPredicted RBP13.6□□□□□ -0.23
USP28-214ENST00000545540 ATF4P18848 351 aaPredicted RBP13.59□□□□□ -0.23
USP28-214ENST00000545540 SORDQ00796 357 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 ASPHD2Q6ICH7 369 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 SEC22AQ96IW7 307 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 INTS14Q96SY0 518 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 POLE3Q9NRF9 147 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 HIF3AQ9Y2N7 669 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 ACOT7O00154 380 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 GLSO94925 669 aaPredicted RBP13.59□□□□□ -0.23
USP28-214ENST00000545540 ACSM4P0C7M7 580 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 CTLA4P16410 223 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 ZNF28P17035 718 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 CD163Q86VB7 1156 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 WDFY1Q8IWB7 410 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 LRRC75AQ8NAA5 344 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 ANGPTL6Q8NI99 470 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 DHRS9Q9BPW9 319 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 COMMD4Q9H0A8 199 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 THADAQ6YHU6 1953 aa13.59□□□□□ -0.23
USP28-214ENST00000545540 ASAH2BP0C7U1 165 aa13.58□□□□□ -0.23
USP28-214ENST00000545540 ACKR1Q16570 336 aa13.58□□□□□ -0.23
USP28-214ENST00000545540 MOGAT2Q3SYC2 334 aa13.58□□□□□ -0.23
USP28-214ENST00000545540 SLC22A6Q4U2R8 563 aa13.58□□□□□ -0.23
USP28-214ENST00000545540 GLYATL3Q5SZD4 288 aa13.58□□□□□ -0.23
USP28-214ENST00000545540 FAM69AQ5T7M9 428 aa13.58□□□□□ -0.23
USP28-214ENST00000545540 CDC20BQ86Y33 519 aa13.58□□□□□ -0.23
USP28-214ENST00000545540 JAGN1Q8N5M9 183 aa13.58□□□□□ -0.23
USP28-214ENST00000545540 B3GNT4Q9C0J1 378 aa13.58□□□□□ -0.23
USP28-214ENST00000545540 TINAGL1Q9GZM7 467 aaPredicted RBP13.58□□□□□ -0.23
USP28-214ENST00000545540 EXO5Q9H790 373 aa13.58□□□□□ -0.23
USP28-214ENST00000545540 WBP1LQ9NX94 342 aa13.58□□□□□ -0.23
USP28-214ENST00000545540 TAS2R5Q9NYW4 299 aa13.58□□□□□ -0.23
USP28-214ENST00000545540 XKRYO14609 159 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 ALOX12BO75342 701 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 CTAG2O75638 210 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 RABIFP47224 123 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 ADAM8P78325 824 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 FUT7Q11130 342 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 TUSC1Q2TAM9 212 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 CMIPQ8IY22 773 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 EXD3Q8N9H8 876 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 KLHDC7BQ96G42 594 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 SPACA5Q96QH8 159 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 CMKLR1Q99788 373 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 GMEB2Q9UKD1 530 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 KIR2DS5A0A0G2JLQ3 304 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 A0A0G2JNG1 304 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 A0A1B0GUH1 482 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 PRAMEF26H0Y7S4 382 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 KIR2DS3K7RE56 304 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 SLC37A1P57057 533 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 AP3S2P59780 193 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 DMWDQ09019 674 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 KIR2DS5Q14953 304 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 STPG2Q8N412 459 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 GPR148Q8TDV2 347 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 CENPMQ9NSP4 180 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 DZANK1Q9NVP4 752 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 TAS2R4Q9NYW5 299 aa13.58□□□□□ -0.24
USP28-214ENST00000545540 PLSCR5A0PG75 271 aa13.57□□□□□ -0.24
USP28-214ENST00000545540 MCRIP1C9JLW8 97 aa13.57□□□□□ -0.24
USP28-214ENST00000545540 CTDSPLO15194 276 aa13.57□□□□□ -0.24
USP28-214ENST00000545540 SUSD5O60279 629 aa13.57□□□□□ -0.24
USP28-214ENST00000545540 NDUFB6O95139 128 aa13.57□□□□□ -0.24
USP28-214ENST00000545540 ECDO95905 644 aaPredicted RBP13.57□□□□□ -0.24
USP28-214ENST00000545540 TGM6O95932 706 aa13.57□□□□□ -0.24
USP28-214ENST00000545540 LPLP06858 475 aa13.57□□□□□ -0.24
USP28-214ENST00000545540 ARRB1P49407 418 aaPredicted RBP13.57□□□□□ -0.24
USP28-214ENST00000545540 NSDHLQ15738 373 aa13.57□□□□□ -0.24
USP28-214ENST00000545540 HACD4Q5VWC8 232 aa13.57□□□□□ -0.24
USP28-214ENST00000545540 LANCL3Q6ZV70 420 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms