RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 ZNF454Q8N9F8 522 aa15.96■□□□□ 0.15
SCARB1-208ENST00000544327 OR10AC1Q8NH08 325 aa15.96■□□□□ 0.15
SCARB1-208ENST00000544327 STT3BQ8TCJ2 826 aa15.96■□□□□ 0.15
SCARB1-208ENST00000544327 DUSP19Q8WTR2 217 aa15.96■□□□□ 0.15
SCARB1-208ENST00000544327 RNF138Q8WVD3 245 aa15.96■□□□□ 0.15
SCARB1-208ENST00000544327 TMEM106AQ96A25 262 aa15.96■□□□□ 0.15
SCARB1-208ENST00000544327 CLDN23Q96B33 292 aa15.96■□□□□ 0.15
SCARB1-208ENST00000544327 FBXL3Q9UKT7 428 aa15.96■□□□□ 0.15
SCARB1-208ENST00000544327 GON4LQ3T8J9 2241 aa15.96■□□□□ 0.15
SCARB1-208ENST00000544327 EXPH5Q8NEV8 1989 aa15.96■□□□□ 0.15
SCARB1-208ENST00000544327 MEIKINA0A087WXM9 373 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 NPIPB13A6NJU9 1138 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 NPIPB4C9JG80 1138 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 GMDSO60547 372 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 SLC16A7O60669 478 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 GLSO94925 669 aaPredicted RBP15.96■□□□□ 0.14
SCARB1-208ENST00000544327 TGM6O95932 706 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 PNLIPP16233 465 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 PSMB1P20618 241 aaKnown RBP15.96■□□□□ 0.14
SCARB1-208ENST00000544327 RPS27P42677 84 aaKnown RBP15.96■□□□□ 0.14
SCARB1-208ENST00000544327 GALK2Q01415 458 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 MTFR2Q6P444 385 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 TMEM71Q6P5X7 295 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 ANKRD37Q7Z713 158 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 SERPINA12Q8IW75 414 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 OR11G2Q8NGC1 345 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 NUBPLQ8TB37 319 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 PHF21AQ96BD5 680 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 ZNF587Q96SQ5 575 aaPredicted RBP15.96■□□□□ 0.14
SCARB1-208ENST00000544327 UTP23Q9BRU9 249 aaKnown RBP15.96■□□□□ 0.14
SCARB1-208ENST00000544327 HSPB11Q9Y547 144 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 NPTNQ9Y639 398 aa15.96■□□□□ 0.14
SCARB1-208ENST00000544327 AKR7A2O43488 359 aa15.95■□□□□ 0.14
SCARB1-208ENST00000544327 ALX3O95076 343 aa15.95■□□□□ 0.14
SCARB1-208ENST00000544327 PLGP00747 810 aaPredicted RBP15.95■□□□□ 0.14
SCARB1-208ENST00000544327 MYF5P13349 255 aa15.95■□□□□ 0.14
SCARB1-208ENST00000544327 CTLA4P16410 223 aa15.95■□□□□ 0.14
SCARB1-208ENST00000544327 MFSD13AQ14CX5 517 aa15.95■□□□□ 0.14
SCARB1-208ENST00000544327 KCTD18Q6PI47 426 aaPredicted RBP15.95■□□□□ 0.14
SCARB1-208ENST00000544327 SEZ6L2Q6UXD5 910 aa15.95■□□□□ 0.14
SCARB1-208ENST00000544327 APCDD1LQ8NCL9 501 aa15.95■□□□□ 0.14
SCARB1-208ENST00000544327 OR51A4Q8NGJ6 313 aa15.95■□□□□ 0.14
SCARB1-208ENST00000544327 GPR137Q96N19 417 aa15.95■□□□□ 0.14
SCARB1-208ENST00000544327 ZNF222Q9UK12 451 aa15.95■□□□□ 0.14
SCARB1-208ENST00000544327 ABCA7Q8IZY2 2146 aa15.95■□□□□ 0.14
SCARB1-208ENST00000544327 A6NIZ1 184 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 XRCC3O43542 346 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 KHDRBS3O75525 346 aaKnown RBP15.94■□□□□ 0.14
SCARB1-208ENST00000544327 HLA-DQA2P01906 255 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 CRABP1P29762 137 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 RAP1BP61224 184 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 RAP1AP62834 184 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 RPS15P62841 145 aaKnown RBP15.94■□□□□ 0.14
SCARB1-208ENST00000544327 ACY1Q03154 408 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 C17orf67Q0P5P2 114 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 LUZP2Q86TE4 346 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 PIAS4Q8N2W9 510 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-208ENST00000544327 DNAAF1Q8NEP3 725 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 SLC17A5Q9NRA2 495 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 ING1Q9UK53 422 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-208ENST00000544327 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 A0A1B0GUH1 482 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 K7ESF4 209 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 ETV2O00321 342 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-208ENST00000544327 ONECUT2O95948 504 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 MAS1P04201 325 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 NAGAP17050 411 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 PTGS2P35354 604 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 MECP2P51608 486 aaKnown RBP15.94■□□□□ 0.14
SCARB1-208ENST00000544327 TOMM20Q15388 145 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 TMEM255AQ5JRV8 349 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 MFSD8Q8NHS3 518 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 ATOH1Q92858 354 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-208ENST00000544327 GCDHQ92947 438 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-208ENST00000544327 OR11A1Q9GZK7 315 aa15.94■□□□□ 0.14
SCARB1-208ENST00000544327 SPARCP09486 303 aa15.93■□□□□ 0.14
SCARB1-208ENST00000544327 CD37P11049 281 aa15.93■□□□□ 0.14
SCARB1-208ENST00000544327 CXCL3P19876 107 aa15.93■□□□□ 0.14
SCARB1-208ENST00000544327 APOBEC1P41238 236 aaKnown RBP15.93■□□□□ 0.14
SCARB1-208ENST00000544327 MAP2K6P52564 334 aa15.93■□□□□ 0.14
SCARB1-208ENST00000544327 C6orf183Q5T699 404 aa15.93■□□□□ 0.14
SCARB1-208ENST00000544327 FAM166AQ6J272 317 aa15.93■□□□□ 0.14
SCARB1-208ENST00000544327 ANKRD16Q6P6B7 361 aa15.93■□□□□ 0.14
SCARB1-208ENST00000544327 KANSL1Q7Z3B3 1105 aa15.93■□□□□ 0.14
SCARB1-208ENST00000544327 CATSPERDQ86XM0 798 aa15.93■□□□□ 0.14
SCARB1-208ENST00000544327 TSEN15Q8WW01 171 aaKnown RBP15.93■□□□□ 0.14
SCARB1-208ENST00000544327 ASB10Q8WXI3 467 aa15.93■□□□□ 0.14
SCARB1-208ENST00000544327 MED30Q96HR3 178 aa15.93■□□□□ 0.14
SCARB1-208ENST00000544327 MRPL15Q9P015 296 aaKnown RBP15.93■□□□□ 0.14
SCARB1-208ENST00000544327 KLK11Q9UBX7 282 aa15.93■□□□□ 0.14
SCARB1-208ENST00000544327 PCNX3Q9H6A9 2034 aa15.93■□□□□ 0.14
SCARB1-208ENST00000544327 RP1P56715 2156 aa15.92■□□□□ 0.14
SCARB1-208ENST00000544327 IGHV3-20A0A0C4DH32 117 aa15.92■□□□□ 0.14
SCARB1-208ENST00000544327 MS4A18H0YCH9 400 aa15.92■□□□□ 0.14
SCARB1-208ENST00000544327 ZNF208O43345 1280 aa15.92■□□□□ 0.14
SCARB1-208ENST00000544327 SRSF10O75494 262 aaKnown RBP15.92■□□□□ 0.14
SCARB1-208ENST00000544327 FSTP19883 344 aa15.92■□□□□ 0.14
SCARB1-208ENST00000544327 RIDAP52758 137 aaKnown RBP15.92■□□□□ 0.14
SCARB1-208ENST00000544327 SNRPD2P62316 118 aaKnown RBP15.92■□□□□ 0.14
SCARB1-208ENST00000544327 ADAM8P78325 824 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms