RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 C19orf24Q9BVV8 132 aa2.74□□□□□ -1.97
SCFD1-207ENST00000544052 REEP4Q9H6H4 257 aa2.74□□□□□ -1.97
SCFD1-207ENST00000544052 ZNF702PQ9H963 129 aa2.74□□□□□ -1.97
SCFD1-207ENST00000544052 ZNF275Q9NSD4 429 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-207ENST00000544052 MARCH5Q9NX47 278 aa2.74□□□□□ -1.97
SCFD1-207ENST00000544052 THUMPD1Q9NXG2 353 aaKnown RBP2.74□□□□□ -1.97
SCFD1-207ENST00000544052 BFARQ9NZS9 450 aa2.74□□□□□ -1.97
SCFD1-207ENST00000544052 CA5BQ9Y2D0 317 aa2.74□□□□□ -1.97
SCFD1-207ENST00000544052 NPTNQ9Y639 398 aa2.74□□□□□ -1.97
SCFD1-207ENST00000544052 GVINP1Q7Z2Y8 2422 aa2.74□□□□□ -1.97
SCFD1-207ENST00000544052 SCN1AP35498 2009 aa2.74□□□□□ -1.97
SCFD1-207ENST00000544052 GREB1Q4ZG55 1949 aa2.74□□□□□ -1.97
SCFD1-207ENST00000544052 ANAPC1Q9H1A4 1944 aa2.74□□□□□ -1.97
SCFD1-207ENST00000544052 DMXL1Q9Y485 3027 aa2.74□□□□□ -1.97
SCFD1-207ENST00000544052 NUP210Q8TEM1 1887 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-207ENST00000544052 OTOGLQ3ZCN5 2332 aa2.74□□□□□ -1.97
SCFD1-207ENST00000544052 RIF1Q5UIP0 2472 aaKnown RBP2.73□□□□□ -1.97
SCFD1-207ENST00000544052 A0A0U1RQS6 177 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 FAM168BA1KXE4 195 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 HSD17B6O14756 317 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 PHOX2AO14813 284 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 CLDN9O95484 217 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 OXSR1O95747 527 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-207ENST00000544052 SLC2A3P11169 496 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 CCNCP24863 283 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 CALCRP30988 508 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 SLC11A1P49279 550 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 MEOX2P50222 304 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 HNRNPA3P51991 378 aaKnown RBP2.73□□□□□ -1.97
SCFD1-207ENST00000544052 SH3BGRP55822 239 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-207ENST00000544052 OGDHQ02218 1023 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 CHRNB3Q05901 458 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 CCDC173Q0VFZ6 552 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 ISXQ2M1V0 245 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 KRTAP27-1Q3LI81 207 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 ZNF658Q5TYW1 1059 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-207ENST00000544052 OR52E8Q6IFG1 317 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 MOB1BQ7L9L4 216 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 H2BFWTQ7Z2G1 175 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 CDR2LQ86X02 465 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-207ENST00000544052 SKA3Q8IX90 412 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 METTL13Q8N6R0 699 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 FAM83FQ8NEG4 500 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-207ENST00000544052 OR2L3Q8NG85 312 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 ANKRD49Q8WVL7 239 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 DNAJA4Q8WW22 397 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-207ENST00000544052 UFD1Q92890 307 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 SLITRK2Q9H156 845 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 NHEJ1Q9H9Q4 299 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-207ENST00000544052 SLC7A10Q9NS82 523 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 COPS3Q9UNS2 423 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 ATG2BQ96BY7 2078 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 PTPRDP23468 1912 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 ZNF638Q14966 1978 aaKnown RBP2.73□□□□□ -1.97
SCFD1-207ENST00000544052 LINC00854A0A1B0GVQ3 168 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 FAM25EA8MYX2 175 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 B4GALT5O43286 388 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 P0C879 139 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 ATP6V1B2P21281 511 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 ANXA13P27216 316 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 CD1CP29017 333 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 SUCLG1P53597 346 aaKnown RBP2.73□□□□□ -1.97
SCFD1-207ENST00000544052 ATP5IP56385 69 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-207ENST00000544052 KLHL38Q2WGJ6 581 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 BCL7AQ4VC05 210 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 SLC25A30Q5SVS4 291 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 CLEC2AQ6UVW9 174 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 TGIF2LXQ8IUE1 241 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 BLIDQ8IZY5 108 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 ZNF525Q8N782 197 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 TMEM105Q8N8V8 129 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 NECAB1Q8N987 351 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 OR4K14Q8NGD5 310 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 ANKRD9Q96BM1 317 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-207ENST00000544052 FGGYQ96C11 551 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 PANX2Q96RD6 677 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 MAPKAP1Q9BPZ7 522 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 TEKT3Q9BXF9 490 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 PPA2Q9H2U2 334 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 NMRAL1Q9HBL8 299 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 C6orf50Q9HD87 102 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 CLEC4EQ9ULY5 219 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 HES2Q9Y543 173 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 HELZP42694 1942 aaKnown RBP2.73□□□□□ -1.97
SCFD1-207ENST00000544052 ZNF292O60281 2723 aa2.73□□□□□ -1.97
SCFD1-207ENST00000544052 ZFHX2Q9C0A1 2572 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-207ENST00000544052 IQANK1A0A1B0GTG1 560 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 A0A1W2PPE3 182 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 A0A1W2PPV9 198 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 A8MXQ7 604 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 M0QZ92 97 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 TBL1XO60907 577 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 UPK3AO75631 287 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 DEXIO95424 95 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 P04436 131 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 ZP3P21754 424 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 DDOSTP39656 456 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 OR1G1P47890 313 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 DIO3P55073 304 aa2.72□□□□□ -1.97
SCFD1-207ENST00000544052 SIGLEC14Q08ET2 396 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms