RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PRR23D1E9PI22 279 aaPredicted RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 RPL36A-HNRNPH2H7BZ11 118 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 EI24O14681 340 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 ARPC3O15145 178 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 RRP9O43818 475 aaKnown RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 AHCYL1O43865 530 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 MITFO75030 526 aaPredicted RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 KHDRBS3O75525 346 aaKnown RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 RAB36O95755 333 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 TXNDC12O95881 172 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 HMGN1P05114 100 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 PRR23D2P0DMB1 279 aaPredicted RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 OR8G3PP0DMU2 310 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 APEHP13798 732 aaKnown RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 ANPEPP15144 967 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 NPR2P20594 1047 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 CRABP1P29762 137 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 CCKARP32238 428 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 CDAP32320 146 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 GRK5P34947 590 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 CDKN2AP42771 156 aaKnown RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 PCYT1AP49585 367 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 ZNF83P51522 516 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 ALDH3A2P51648 485 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 ESRRGP62508 458 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 TUBA1BP68363 451 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 TUBA4AP68366 448 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 PIGFQ07326 219 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 NPRL3Q12980 569 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 TAB1Q15750 504 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 SNAPC1Q16533 368 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 LRRC36Q1X8D7 754 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 PGGHGQ32M88 737 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 ZIK1Q3SY52 487 aaPredicted RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 SLC36A2Q495M3 483 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 TMEM236Q5W0B7 351 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 ZNF787Q6DD87 383 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 TMEM53Q6P2H8 277 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 FAHD1Q6P587 224 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 LRFN4Q6PJG9 635 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 NHLRC1Q6VVB1 395 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 PTCHD4Q6ZW05 846 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 TUBA1AQ71U36 451 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 SSX8Q7RTT4 187 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 SLC16A14Q7RTX9 510 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 FAM122BQ7Z309 247 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 DEPDC4Q8N2C3 294 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 LNX2Q8N448 690 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 LRRC18Q8N456 261 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 SLC22A24Q8N4F4 322 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 CBR4Q8N4T8 237 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 CYB561A3Q8NBI2 242 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 PROKR2Q8NFJ6 384 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 OR10H5Q8NGA6 315 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 OR4Q3Q8NH05 313 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 BCL2L2Q92843 193 aaPredicted RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 ZNF837Q96EG3 531 aaPredicted RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 MUS81Q96NY9 551 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 FOXN4Q96NZ1 517 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 KCNK17Q96T54 332 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 SH3GL3Q99963 347 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 OSBPL10Q9BXB5 764 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 MRPL13Q9BYD1 178 aaKnown RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 VCXQ9H320 206 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 FN3KQ9H479 309 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 ESRP2Q9H6T0 727 aaKnown RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 DCLRE1BQ9H816 532 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 CCNB1IP1Q9NPC3 277 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 RPRD1BQ9NQG5 326 aaKnown RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 SLC17A5Q9NRA2 495 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 TMEM38BQ9NVV0 291 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 TVP23BQ9NYZ1 205 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 REV1Q9UBZ9 1251 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 KCNN3Q9UGI6 736 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 COA3Q9Y2R0 106 aaPredicted RBP5.54□□□□□ -1.52
LTBR-212ENST00000543542 CACNA1CQ13936 2221 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 A6NNC1 897 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 FAM171A2A8MVW0 826 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 BHLHE40O14503 412 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 UBL3O95164 117 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 HLA-HP01893 362 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 TP53P04637 393 aaPredicted RBP5.53□□□□□ -1.52
LTBR-212ENST00000543542 CD3EP07766 207 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 HOXB1P14653 301 aaPredicted RBP5.53□□□□□ -1.52
LTBR-212ENST00000543542 CTLA4P16410 223 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 ZNF823P16415 610 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 IGFBP2P18065 325 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 CRYGSP22914 178 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 PAX7P23759 505 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 LAP3P28838 519 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 GIPRP48546 466 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 PTDSS1P48651 473 aaKnown RBP5.53□□□□□ -1.52
LTBR-212ENST00000543542 RPS7P62081 194 aaKnown RBP5.53□□□□□ -1.52
LTBR-212ENST00000543542 RAB1AP62820 205 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 HSF2Q03933 536 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 TLE4Q04727 773 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 PLP2Q04941 152 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 CRMP1Q14194 572 aa5.53□□□□□ -1.52
LTBR-212ENST00000543542 PTGES3Q15185 160 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms