RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	MAP6	Q96JE9	813 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	CEP19	Q96LK0	163 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	TRNT1	Q96Q11	434 aa	Known RBP	5.69	□□□□□ -1.5
CIT-213	ENST00000543324	STAC	Q99469	402 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	EPYC	Q99645	322 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	PIGQ	Q9BRB3	760 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	SPATA9	Q9BWV2	254 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	RBM24	Q9BX46	236 aa	Known RBP	5.69	□□□□□ -1.5
CIT-213	ENST00000543324	TAPBPL	Q9BX59	468 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	CDCA4	Q9BXL8	241 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	RNF121	Q9H920	327 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	IL1RAP	Q9NPH3	570 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	SDHAF3	Q9NRP4	125 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	KRT84	Q9NSB2	600 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	EXD2	Q9NVH0	621 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	GPATCH2	Q9NW75	528 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	FBXO34	Q9NWN3	711 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	VNN3	Q9NY84	501 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	PTTG3P	Q9NZH4	202 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	MED11	Q9P086	117 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	5.69	□□□□□ -1.5
CIT-213	ENST00000543324	RPS6KA6	Q9UK32	745 aa		5.69	□□□□□ -1.5
CIT-213	ENST00000543324	PLCE1	Q9P212	2302 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324		A0A087WZY1	265 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	CCDC182	A6NF36	153 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	EFCAB10	A6NFE3	127 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	TRIM77	I1YAP6	450 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	hCG_2039718	K7EN88	272 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	AP3D1	O14617	1153 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	EFNA2	O43921	213 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	KIAA0513	O60268	411 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	SCN2B	O60939	215 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	SS18L1	O75177	396 aa	Predicted RBP	5.68	□□□□□ -1.5
CIT-213	ENST00000543324	AQP8	O94778	261 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	HMGN2	P05204	90 aa	Known RBP	5.68	□□□□□ -1.5
CIT-213	ENST00000543324	FABP3	P05413	133 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	LAMP1	P11279	417 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	G6PD	P11413	515 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	HK1	P19367	917 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	IL11	P20809	199 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	PRKACG	P22612	351 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	CRYGS	P22914	178 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	MYL9	P24844	172 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	ZFP36	P26651	326 aa	Known RBP	5.68	□□□□□ -1.5
CIT-213	ENST00000543324	GABRA3	P34903	492 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	TALDO1	P37837	337 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	SLC6A8	P48029	635 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	PLAUR	Q03405	335 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	SRY	Q05066	204 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	RIN1	Q13671	783 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	ZNF79	Q15937	498 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	KLHL26	Q53HC5	615 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	SLC25A53	Q5H9E4	307 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	TOR2A	Q5JU69	321 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	SLC35F1	Q5T1Q4	408 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	RAET1L	Q5VY80	246 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	CDC73	Q6P1J9	531 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	METAP1D	Q6UB28	335 aa	Predicted RBP	5.68	□□□□□ -1.5
CIT-213	ENST00000543324	TMPRSS11A	Q6ZMR5	421 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	C22orf34	Q6ZV56	151 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	CBLL1	Q75N03	491 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	EIF3M	Q7L2H7	374 aa	Known RBP	5.68	□□□□□ -1.5
CIT-213	ENST00000543324	KCTD20	Q7Z5Y7	419 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	LUZP2	Q86TE4	346 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	SERPINA11	Q86U17	422 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	C1QL4	Q86Z23	238 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	MISP	Q8IVT2	679 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	FAM71C	Q8NEG0	241 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	DUSP18	Q8NEJ0	188 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	OR4M1	Q8NGD0	313 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	CLHC1	Q8NHS4	586 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	LHFPL5	Q8TAF8	219 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	FNDC9	Q8TBE3	224 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	SNAPC3	Q92966	411 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	ZBTB8A	Q96BR9	441 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	ZNF524	Q96C55	264 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	C16orf58	Q96GQ5	468 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	ZNF845	Q96IR2	970 aa	Predicted RBP	5.68	□□□□□ -1.5
CIT-213	ENST00000543324	DMRTB1	Q96MA1	342 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	NEDD4L	Q96PU5	975 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	TNFRSF13C	Q96RJ3	184 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	THUMPD3	Q9BV44	507 aa	Known RBP	5.68	□□□□□ -1.5
CIT-213	ENST00000543324	PINK1	Q9BXM7	581 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	OR51E2	Q9H255	320 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	PIGU	Q9H490	435 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	SERHL2	Q9H4I8	314 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	IKZF5	Q9H5V7	419 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	PIF1	Q9H611	641 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	CXorf36	Q9H7Y0	433 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	PTGES2	Q9H7Z7	377 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	HHATL	Q9HCP6	504 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	RANGRF	Q9HD47	186 aa	Predicted RBP	5.68	□□□□□ -1.5
CIT-213	ENST00000543324	EQTN	Q9NQ60	294 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	UBQLN4	Q9NRR5	601 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	SLC25A37	Q9NYZ2	338 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	MRTO4	Q9UKD2	239 aa	Known RBP	5.68	□□□□□ -1.5
CIT-213	ENST00000543324	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
CIT-213	ENST00000543324	ICAM5	Q9UMF0	924 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324	DNAH3	Q8TD57	4116 aa		5.68	□□□□□ -1.5
CIT-213	ENST00000543324		A0A1W2PQ09	198 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms