RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 ZNF217O75362 1048 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 GABRA5P31644 462 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 SNRPGP62308 76 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 BLOC1S1P78537 153 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 PMP22Q01453 160 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 OC90Q02509 493 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 NHLH1Q02575 133 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 TSPAN31Q12999 210 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 PLA2G7Q13093 441 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 KIR2DS5Q14953 304 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 C18orf63Q68DL7 685 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 SLC48A1Q6P1K1 146 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 Q6ZTK2 550 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 PARGQ86W56 976 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 CATSPERDQ86XM0 798 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 MEX3DQ86XN8 651 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 CAMKVQ8NCB2 501 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 OR5T3Q8NGG3 340 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 STK35Q8TDR2 534 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 GAL3ST3Q96A11 431 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 CNRIP1Q96F85 164 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 WDR89Q96FK6 387 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 FAM210BQ96KR6 192 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 ZFYVE21Q9BQ24 234 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 SPXQ9BT56 116 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 SF3B6Q9Y3B4 125 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 FXYD6-FXYD2A0A087WZ82 144 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 GLOD5A6NK44 160 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 G3V3Q6 166 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 ZNF593O00488 134 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 CYB5R3P00387 301 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 STXBP1P61764 594 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 PPP1CAP62136 330 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 ZNF750Q32MQ0 723 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 MOGAT2Q3SYC2 334 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 CDNFQ49AH0 187 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 FIGLAQ6QHK4 219 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 PRSS57Q6UWY2 283 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 LRRC69Q6ZNQ3 347 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 RNF44Q7L0R7 432 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 C6orf120Q7Z4R8 191 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 MRGPRDQ8TDS7 321 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 ZNF479Q96JC4 524 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 ZNF681Q96N22 645 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 CDX2Q99626 313 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 FXYD6Q9H0Q3 95 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 TMEM74BQ9NUR3 256 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 MED9Q9NWA0 146 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 FBXO34Q9NWN3 711 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 NINQ8N4C6 2090 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 A6NLC8 198 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 FAM170BA6NMN3 283 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 IFNW1P05000 195 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 HSD11B1P28845 292 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 GRK6P43250 576 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 TNFRSF17Q02223 184 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 SNTB2Q13425 540 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 HLXQ14774 488 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 ZNF791Q3KP31 576 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 CBLN2Q8IUK8 224 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 OR10G6Q8NH81 332 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 BAHD1Q8TBE0 780 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 SCARB1Q8WTV0 552 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 SLC38A5Q8WUX1 472 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 GEMIN6Q8WXD5 167 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 NINJ1Q92982 152 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 ZNF2Q9BSG1 426 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 ADAT1Q9BUB4 502 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 FAIM2Q9BWQ8 316 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 JAM3Q9BX67 310 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 TMPRSS5Q9H3S3 457 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 THSD1Q9NS62 852 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 ENTPD2Q9Y5L3 495 aa7.28□□□□□ -1.24
PDLIM5-221ENST00000542407 METTL12A8MUP2 240 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 SOCS6O14544 535 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 GMFGO60234 142 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 HLA-DPB1P04440 258 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 ANKRD34CP0C6C1 535 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 PEPDP12955 493 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 XCR1P46094 333 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 HTR5AP47898 357 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 SIM1P81133 766 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 DGCR2P98153 550 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 C1orf61Q13536 156 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 TPBGQ13641 420 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 UBXN2BQ14CS0 331 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 SYT14P1Q58G82 188 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 RNASE10Q5GAN6 216 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 TNFAIP8L2Q6P589 184 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 SHISA2Q6UWI4 295 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 LRRN1Q6UXK5 716 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 TMEM64Q6YI46 380 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 FGD2Q7Z6J4 655 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 TAF8Q7Z7C8 310 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 SHISA5Q8N114 240 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 ARHGEF39Q8N4T4 335 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 OR5M3Q8NGP4 307 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 OR1S1Q8NH92 325 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 KLHDC7BQ96G42 594 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 GUCD1Q96NT3 240 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms