RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.9□□□□□ -0.18
CNOT9-208ENST00000542068 CGGBP1Q9UFW8 167 aaPredicted RBP13.9□□□□□ -0.18
CNOT9-208ENST00000542068 TMEM272A0A1B0GTI8 110 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 DCDC2BA2VCK2 349 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 TACSTD2P09758 323 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 RAB40ALP0C0E4 278 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 OR10K1Q8NGX5 313 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 FLVCR1-AS1Q8TAF5 88 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 RAB40AQ8WXH6 277 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 AIFM2Q9BRQ8 373 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 PLEKHA1Q9HB21 404 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 PLEKHA6Q9Y2H5 1048 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 ZDBF2Q9HCK1 2354 aa13.9□□□□□ -0.18
CNOT9-208ENST00000542068 FAM74A7A6NL05 159 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 ZNF28P17035 718 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 MNDAP41218 407 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 FAM74A3Q4VXF1 159 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 LINC01590Q5TEZ4 76 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 ZNF546Q86UE3 836 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 BVESQ8NE79 360 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 OR52H1Q8NGJ2 320 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 OR1S1Q8NH92 325 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.89□□□□□ -0.19
CNOT9-208ENST00000542068 SLC25A28Q96A46 364 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 TM4SF19Q96DZ7 209 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 ZNF75AQ96N20 296 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 SHARPINQ9H0F6 387 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 GRHPRQ9UBQ7 328 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 KCNG2Q9UJ96 466 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 FANCMQ8IYD8 2048 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 NPSR1Q6W5P4 371 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 MDGA2Q7Z553 956 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 CD163Q86VB7 1156 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 ZNF321PQ8N8H1 164 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 C19orf47Q8N9M1 422 aaKnown RBP13.89□□□□□ -0.19
CNOT9-208ENST00000542068 PNPLA2Q96AD5 504 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 ZNF471Q9BX82 626 aaPredicted RBP13.89□□□□□ -0.19
CNOT9-208ENST00000542068 SLC7A5P2Q9GIP4 190 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 TINAGL1Q9GZM7 467 aaPredicted RBP13.89□□□□□ -0.19
CNOT9-208ENST00000542068 COMMD4Q9H0A8 199 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 EVA1AQ9H8M9 152 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 ZNF337Q9Y3M9 751 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 C17orf105B2RV13 164 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 HCRTR2O43614 444 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 NKX2-2O95096 273 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 AMY2AP04746 511 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 GPR143P51810 404 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 LUMP51884 338 aaPredicted RBP13.89□□□□□ -0.19
CNOT9-208ENST00000542068 TMEM88Q6PEY1 159 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 BIVMQ86UB2 503 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 FAM219AQ8IW50 185 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 BEST3Q8N1M1 668 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 CCDC74AQ96AQ1 378 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 FRYLO94915 3013 aa13.89□□□□□ -0.19
CNOT9-208ENST00000542068 PRAMEF26H0Y7S4 382 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 UPK3AO75631 287 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 SLC35E2P0CK97 266 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 SMIM10L1P0DMW3 83 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 PRSS3P35030 304 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 RABIFP47224 123 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 RAB38P57729 211 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 C2orf76Q3KRA6 126 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 OLFML2AQ68BL7 652 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 MED25Q71SY5 747 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 ZNF550Q7Z398 422 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 PM20D2Q8IYS1 436 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 OR2G2Q8NGZ5 317 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 CASTOR1Q8WTX7 329 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 C3orf49Q96BT1 292 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 SMIM10Q96HG1 83 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 OR10A5Q9H207 317 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 LYRM4Q9HD34 91 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 FITM1A5D6W6 292 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 GGT3PA6NGU5 568 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 TGFBR3LH3BV60 316 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 OR2A4O95047 310 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 ITGA5P08648 1049 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 CPN1P15169 458 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 DRD1P21728 446 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 EIF2B5Q13144 721 aaKnown RBP13.88□□□□□ -0.19
CNOT9-208ENST00000542068 UBXN2BQ14CS0 331 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 SMAD2Q15796 467 aaKnown RBP13.88□□□□□ -0.19
CNOT9-208ENST00000542068 C1QL3Q5VWW1 255 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 ESX1Q8N693 406 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 OR4S1Q8NGB4 309 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 MARC2Q969Z3 335 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 LRRC46Q96FV0 321 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 OR2A7Q96R45 310 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 ADAT1Q9BUB4 502 aaKnown RBP13.88□□□□□ -0.19
CNOT9-208ENST00000542068 IFT46Q9NQC8 304 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 EMC3Q9P0I2 261 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 CA14Q9ULX7 337 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 NOP16Q9Y3C1 178 aaKnown RBP13.88□□□□□ -0.19
CNOT9-208ENST00000542068 A0A087WUJ7 227 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 C2orf72A6NCS6 295 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 KRBOX1C9JBD0 128 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 D6RAR5 112 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 CTAG2O75638 210 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 SPARCP09486 303 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 MEP1BQ16820 701 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms