RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ETFDHQ16134 617 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 ZSWIM7Q19AV6 140 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 GPAT3Q53EU6 434 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 CXorf66Q5JRM2 361 aaPredicted RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 C1QTNF12Q5T7M4 302 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 GGNBP1Q5YKI7 109 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 SAXO2Q658L1 398 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 ARSKQ6UWY0 536 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 EIF3MQ7L2H7 374 aaKnown RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 SHFQ7M4L6 423 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 GALNT10Q86SR1 603 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 UBQLNLQ8IYU4 475 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 GTPBP8Q8N3Z3 284 aaPredicted RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 GATSQ8NAP1 163 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 OR5D16Q8NGK9 328 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 OR5W2Q8NH69 310 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 CKAP2Q8WWK9 683 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 TMEM234Q8WY98 164 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 SMPDL3BQ92485 455 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 RNASE6Q93091 150 aaKnown RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 ROPN1LQ96C74 230 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 C14orf79Q96F83 325 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 RRNAD1Q96FB5 475 aaKnown RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 OTUB1Q96FW1 271 aaPredicted RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 SH3YL1Q96HL8 342 aaPredicted RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF559Q9BR84 538 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 SIKE1Q9BRV8 207 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 PCGF1Q9BSM1 259 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 LAT2Q9GZY6 243 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 RBM38Q9H0Z9 239 aaKnown RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 Q9H521 79 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 ARMC7Q9H6L4 198 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 MTHFD2LQ9H903 347 aaPredicted RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 HINT3Q9NQE9 182 aaKnown RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 SDR39U1Q9NRG7 319 aaPredicted RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 SERINC1Q9NRX5 453 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 GLRX2Q9NS18 164 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 MRGBPQ9NV56 204 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 MED17Q9NVC6 651 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 ELOVL5Q9NYP7 299 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 CALML5Q9NZT1 146 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 KCNN3Q9UGI6 736 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 MCTS1Q9ULC4 181 aaKnown RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 SLC35A3Q9Y2D2 325 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 SH3GLB1Q9Y371 365 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF175Q9Y473 711 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 KCNE3Q9Y6H6 103 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 TENM4Q6N022 2769 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 ICE1Q9Y2F5 2266 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 NUP214P35658 2090 aaPredicted RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 EEF1E1-BLOC1S5C9J1V9 151 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 NPIPB9F8W1W9 429 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 H3BNX3 289 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 C19orf84I3L1E1 186 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 IFNL4K9M1U5 179 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF195O14628 629 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 CASKO14936 926 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 EEF1E1O43324 174 aaKnown RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 FCMRO60667 390 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 FKBP6O75344 327 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 UGT2B17O75795 530 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 PLGP00747 810 aaPredicted RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 HIST1H2ABP04908 130 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 DBIP07108 87 aaKnown RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 PPIBP23284 216 aaKnown RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 ELK4P28324 431 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 IL12AP29459 219 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 CRATP43155 626 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 MRPL19P49406 292 aaKnown RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 ATP4BP51164 291 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 CCR4P51679 360 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF136P52737 540 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 CASP9P55211 416 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 CLDN15P56746 228 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 CARD18P57730 90 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 KCNJ10P78508 379 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 TLE4Q04727 773 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 SLC34A1Q06495 639 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 TFF3Q07654 80 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 MYBPHQ13203 477 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 KLF9Q13886 244 aaPredicted RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 SQLEQ14534 574 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 PON3Q15166 354 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 TWIST1Q15672 202 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 TMEM44Q2T9K0 475 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 TRMT5Q32P41 509 aaKnown RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 PLPPR5Q32ZL2 321 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 FBXL19-AS1Q494R0 122 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 DCST1Q5T197 706 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 PDZK1Q5T2W1 519 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 METTL21CQ5VZV1 264 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 FAM91A1Q658Y4 838 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 GPR139Q6DWJ6 353 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 TYW3Q6IPR3 259 aaKnown RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 TNFAIP8L2Q6P589 184 aaPredicted RBP4.76□□□□□ -1.65
CPSF7-220ENST00000541963 C16orf54Q6UWD8 224 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 LRRC74BQ6ZQY2 392 aa4.76□□□□□ -1.65
CPSF7-220ENST00000541963 HIST3H2AQ7L7L0 130 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms