RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 YOD1Q5VVQ6 348 aaPredicted RBP11.13□□□□□ -0.63
NPC1-202ENST00000540608 CBLN3Q6UW01 205 aa11.13□□□□□ -0.63
NPC1-202ENST00000540608 MED25Q71SY5 747 aa11.13□□□□□ -0.63
NPC1-202ENST00000540608 SLC22A18ASQ8N1D0 253 aa11.13□□□□□ -0.63
NPC1-202ENST00000540608 ZBTB44Q8NCP5 570 aa11.13□□□□□ -0.63
NPC1-202ENST00000540608 PHOSPHO1Q8TCT1 267 aa11.13□□□□□ -0.63
NPC1-202ENST00000540608 TNFAIP8L1Q8WVP5 186 aa11.13□□□□□ -0.63
NPC1-202ENST00000540608 ST8SIA4Q92187 359 aa11.13□□□□□ -0.63
NPC1-202ENST00000540608 NKX2-4Q9H2Z4 354 aa11.13□□□□□ -0.63
NPC1-202ENST00000540608 C12orf4Q9NQ89 552 aa11.13□□□□□ -0.63
NPC1-202ENST00000540608 EXOSC3Q9NQT5 275 aaKnown RBP11.13□□□□□ -0.63
NPC1-202ENST00000540608 PRODH2Q9UF12 536 aa11.13□□□□□ -0.63
NPC1-202ENST00000540608 LOC100289279A0A1B0GTE1 492 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 H3BSH0 61 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 CDC40O60508 579 aaKnown RBP eCLIP11.12□□□□□ -0.63
NPC1-202ENST00000540608 CLPSP04118 112 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 ITGA5P08648 1049 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 HPGDP15428 266 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 MAOAP21397 527 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 AKT2P31751 481 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 RPS27P42677 84 aaKnown RBP11.12□□□□□ -0.63
NPC1-202ENST00000540608 CCR4P51679 360 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 UBE2MP61081 183 aaKnown RBP11.12□□□□□ -0.63
NPC1-202ENST00000540608 DLX2Q07687 328 aaPredicted RBP11.12□□□□□ -0.63
NPC1-202ENST00000540608 WDR38Q5JTN6 314 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 ZNF660Q6AZW8 331 aaPredicted RBP11.12□□□□□ -0.63
NPC1-202ENST00000540608 ARMC6Q6NXE6 501 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 TFAP2EQ6VUC0 442 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 HSD17B13Q7Z5P4 300 aaPredicted RBP11.12□□□□□ -0.63
NPC1-202ENST00000540608 CDH26Q8IXH8 852 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 PDZD9Q8IXQ8 264 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 CLEC1AQ8NC01 280 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 BVESQ8NE79 360 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 OR13H1Q8NG92 308 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 OR5M9Q8NGP3 310 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 OR6K3Q8NGY3 331 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 OIT3Q8WWZ8 545 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 FAM3DQ96BQ1 224 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 KTI12Q96EK9 354 aaPredicted RBP11.12□□□□□ -0.63
NPC1-202ENST00000540608 LMF1Q96S06 567 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 GAS2L1Q99501 681 aaPredicted RBP11.12□□□□□ -0.63
NPC1-202ENST00000540608 CHST6Q9GZX3 395 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 C1orf198Q9H425 327 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 EXO5Q9H790 373 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 TMEM138Q9NPI0 162 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 LRP4O75096 1905 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 NUP210LQ5VU65 1888 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 TMEM272A0A1B0GTI8 110 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 SLC22A23A1A5C7 686 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 CD3DP04234 171 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 MELTFP08582 738 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 RPA2P15927 270 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 MST1P26927 711 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 CCINQ13939 588 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 TOMM20Q15388 145 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 RAB11BQ15907 218 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 C4orf46Q504U0 113 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 STEAP1BQ6NZ63 245 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 ARSKQ6UWY0 536 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 EIF4E3Q8N5X7 224 aaKnown RBP11.12□□□□□ -0.63
NPC1-202ENST00000540608 C19orf47Q8N9M1 422 aaKnown RBP11.12□□□□□ -0.63
NPC1-202ENST00000540608 OR1S1Q8NH92 325 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 OTOSQ8NHW6 89 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 ADAMTS18Q8TE60 1221 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 DMRTA2Q96SC8 542 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 HS3ST3A1Q9Y663 406 aa11.12□□□□□ -0.63
NPC1-202ENST00000540608 TTLL8A6PVC2 850 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 LGALS8O00214 317 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 SLC17A2O00624 439 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 SCDO00767 359 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 ZNF264O43296 627 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 PRKNO60260 465 aaPredicted RBP11.11□□□□□ -0.63
NPC1-202ENST00000540608 GPANK1O95872 356 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 WNT11O96014 354 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 ITGB2P05107 769 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 EIF2B5Q13144 721 aaKnown RBP11.11□□□□□ -0.63
NPC1-202ENST00000540608 FAM166AQ6J272 317 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 AVL9Q8NBF6 648 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 GPX8Q8TED1 209 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 TSEN15Q8WW01 171 aaKnown RBP11.11□□□□□ -0.63
NPC1-202ENST00000540608 TAAR8Q969N4 342 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 ZNF524Q96C55 264 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 AMELYQ99218 206 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 SYT4Q9H2B2 425 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 ELOVL3Q9HB03 270 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 CLEC1BQ9P126 229 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 MEIS3P1A6NDR6 274 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 RFPL4AA6NLU0 287 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 CHURC1-FNTBB4DL54 471 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 RFPL4AL1F8VTS6 287 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 KDM4BO94953 1096 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 MPGP29372 298 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 KCNAB1Q14722 419 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 SLC17A1Q14916 467 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 FAM122CQ6P4D5 195 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 C11orf88Q6PI97 169 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 LRRC69Q6ZNQ3 347 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 PM20D2Q8IYS1 436 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 OR8S1Q8NH09 359 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 DVL3Q92997 716 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms