RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 TACC2O95359 2948 aa19.26■□□□□ 0.67
TRIM65-202ENST00000540128 ZNF503-AS2A6NEH8 195 aa19.25■□□□□ 0.67
TRIM65-202ENST00000540128 E2F6O75461 281 aa19.25■□□□□ 0.67
TRIM65-202ENST00000540128 SEC14L2O76054 403 aa19.25■□□□□ 0.67
TRIM65-202ENST00000540128 SLC2A10O95528 541 aa19.25■□□□□ 0.67
TRIM65-202ENST00000540128 PPP1R3DO95685 299 aa19.25■□□□□ 0.67
TRIM65-202ENST00000540128 IGLV1-44P01699 117 aa19.25■□□□□ 0.67
TRIM65-202ENST00000540128 TP53P04637 393 aaPredicted RBP19.25■□□□□ 0.67
TRIM65-202ENST00000540128 OR8G3PP0DMU2 310 aa19.25■□□□□ 0.67
TRIM65-202ENST00000540128 MRPS34P82930 218 aaKnown RBP19.25■□□□□ 0.67
TRIM65-202ENST00000540128 FMODQ06828 376 aa19.25■□□□□ 0.67
TRIM65-202ENST00000540128 CD47Q08722 323 aa19.25■□□□□ 0.67
TRIM65-202ENST00000540128 KRR1Q13601 381 aaKnown RBP19.25■□□□□ 0.67
TRIM65-202ENST00000540128 SHQ1Q6PI26 577 aaKnown RBP19.25■□□□□ 0.67
TRIM65-202ENST00000540128 ZNF704Q6ZNC4 412 aaPredicted RBP19.25■□□□□ 0.67
TRIM65-202ENST00000540128 FOXL2NBQ6ZUU3 175 aa19.25■□□□□ 0.67
TRIM65-202ENST00000540128 GTPBP3Q969Y2 492 aaKnown RBP19.25■□□□□ 0.67
TRIM65-202ENST00000540128 RASD2Q96D21 266 aa19.25■□□□□ 0.67
TRIM65-202ENST00000540128 RADILQ96JH8 1075 aa19.25■□□□□ 0.67
TRIM65-202ENST00000540128 ERMAPQ96PL5 475 aaPredicted RBP19.25■□□□□ 0.67
TRIM65-202ENST00000540128 NIPSNAP1Q9BPW8 284 aa19.25■□□□□ 0.67
TRIM65-202ENST00000540128 DENND2DQ9H6A0 471 aaPredicted RBP19.25■□□□□ 0.67
TRIM65-202ENST00000540128 ZNF224Q9NZL3 707 aa19.25■□□□□ 0.67
TRIM65-202ENST00000540128 HRNRQ86YZ3 2850 aaPredicted RBP19.25■□□□□ 0.67
TRIM65-202ENST00000540128 PLCE1Q9P212 2302 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 HEATR1Q9H583 2144 aaKnown RBP19.24■□□□□ 0.67
TRIM65-202ENST00000540128 PLAUP00749 431 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 IGKV3-15P01624 115 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 FCGR1AP12314 374 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 NPR2P20594 1047 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 FASP25445 335 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 ARR3P36575 388 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 TUBA1BP68363 451 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 TUBA4AP68366 448 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 GABPB1Q06547 395 aaPredicted RBP19.24■□□□□ 0.67
TRIM65-202ENST00000540128 KPNB1Q14974 876 aaKnown RBP19.24■□□□□ 0.67
TRIM65-202ENST00000540128 TUBA1AQ71U36 451 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 DPPA2Q7Z7J5 298 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 SKA3Q8IX90 412 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 LILRB1Q8NHL6 650 aaPredicted RBP19.24■□□□□ 0.67
TRIM65-202ENST00000540128 SNX18Q96RF0 628 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 IFT27Q9BW83 186 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 PLA2G12AQ9BZM1 189 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 EGLN3Q9H6Z9 239 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 SIAEQ9HAT2 523 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 REV1Q9UBZ9 1251 aa19.24■□□□□ 0.67
TRIM65-202ENST00000540128 M0R1B8 84 aa19.23■□□□□ 0.67
TRIM65-202ENST00000540128 BHLHE40O14503 412 aa19.23■□□□□ 0.67
TRIM65-202ENST00000540128 HLA-HP01893 362 aa19.23■□□□□ 0.67
TRIM65-202ENST00000540128 ANXA8P13928 327 aa19.23■□□□□ 0.67
TRIM65-202ENST00000540128 CDKN2AP42771 156 aaKnown RBP19.23■□□□□ 0.67
TRIM65-202ENST00000540128 ARHGDIAP52565 204 aa19.23■□□□□ 0.67
TRIM65-202ENST00000540128 PTCHD4Q6ZW05 846 aa19.23■□□□□ 0.67
TRIM65-202ENST00000540128 C10orf67Q8IYJ2 551 aa19.23■□□□□ 0.67
TRIM65-202ENST00000540128 HS3ST5Q8IZT8 346 aa19.23■□□□□ 0.67
TRIM65-202ENST00000540128 OR52L1Q8NGH7 329 aa19.23■□□□□ 0.67
TRIM65-202ENST00000540128 OR8D4Q8NGM9 314 aa19.23■□□□□ 0.67
TRIM65-202ENST00000540128 NRGNQ92686 78 aa19.23■□□□□ 0.67
TRIM65-202ENST00000540128 ZNF75AQ96N20 296 aa19.23■□□□□ 0.67
TRIM65-202ENST00000540128 SLC38A2Q96QD8 506 aa19.23■□□□□ 0.67
TRIM65-202ENST00000540128 RAB3IPQ96QF0 476 aaPredicted RBP19.23■□□□□ 0.67
TRIM65-202ENST00000540128 BDH2Q9BUT1 245 aa19.23■□□□□ 0.67
TRIM65-202ENST00000540128 PDZD2O15018 2839 aa19.22■□□□□ 0.67
TRIM65-202ENST00000540128 SHISA9B4DS77 424 aa19.22■□□□□ 0.67
TRIM65-202ENST00000540128 SOCS2O14508 198 aa19.22■□□□□ 0.67
TRIM65-202ENST00000540128 ABCD4O14678 606 aa19.22■□□□□ 0.67
TRIM65-202ENST00000540128 FARS2O95363 451 aaKnown RBP19.22■□□□□ 0.67
TRIM65-202ENST00000540128 PRKACGP22612 351 aa19.22■□□□□ 0.67
TRIM65-202ENST00000540128 FAM27BQ5VT28 67 aa19.22■□□□□ 0.67
TRIM65-202ENST00000540128 MDP1Q86V88 176 aa19.22■□□□□ 0.67
TRIM65-202ENST00000540128 LNX2Q8N448 690 aa19.22■□□□□ 0.67
TRIM65-202ENST00000540128 OR5K1Q8NHB7 308 aa19.22■□□□□ 0.67
TRIM65-202ENST00000540128 NANOS1Q8WY41 292 aaKnown RBP19.22■□□□□ 0.67
TRIM65-202ENST00000540128 NSMAFQ92636 917 aa19.22■□□□□ 0.67
TRIM65-202ENST00000540128 NABP1Q96AH0 204 aa19.22■□□□□ 0.67
TRIM65-202ENST00000540128 LIME1Q9H400 295 aa19.22■□□□□ 0.67
TRIM65-202ENST00000540128 EDARQ9UNE0 448 aa19.22■□□□□ 0.67
TRIM65-202ENST00000540128 IGHV1-18A0A0C4DH31 117 aa19.21■□□□□ 0.67
TRIM65-202ENST00000540128 H7C1C5 153 aa19.21■□□□□ 0.67
TRIM65-202ENST00000540128 UBL3O95164 117 aa19.21■□□□□ 0.67
TRIM65-202ENST00000540128 IGFBP1P08833 259 aaPredicted RBP19.21■□□□□ 0.67
TRIM65-202ENST00000540128 HIST1H1CP16403 213 aaKnown RBP19.21■□□□□ 0.67
TRIM65-202ENST00000540128 LCN6P62502 163 aa19.21■□□□□ 0.67
TRIM65-202ENST00000540128 GSG1Q2KHT4 349 aa19.21■□□□□ 0.67
TRIM65-202ENST00000540128 CLEC12AQ5QGZ9 265 aa19.21■□□□□ 0.67
TRIM65-202ENST00000540128 ZNF362Q5T0B9 420 aaPredicted RBP19.21■□□□□ 0.67
TRIM65-202ENST00000540128 PAMR1Q6UXH9 720 aa19.21■□□□□ 0.67
TRIM65-202ENST00000540128 CCDC168Q8NDH2 2452 aa19.21■□□□□ 0.67
TRIM65-202ENST00000540128 DDOQ99489 341 aa19.21■□□□□ 0.67
TRIM65-202ENST00000540128 SYT4Q9H2B2 425 aa19.21■□□□□ 0.67
TRIM65-202ENST00000540128 NOX3Q9HBY0 568 aa19.21■□□□□ 0.67
TRIM65-202ENST00000540128 ST6GALNAC2Q9UJ37 374 aa19.21■□□□□ 0.67
TRIM65-202ENST00000540128 BAIAP2Q9UQB8 552 aa19.21■□□□□ 0.67
TRIM65-202ENST00000540128 CREBBPQ92793 2442 aa19.2■□□□□ 0.66
TRIM65-202ENST00000540128 ANKRD17O75179 2603 aaKnown RBP19.2■□□□□ 0.66
TRIM65-202ENST00000540128 HS3ST1O14792 307 aa19.2■□□□□ 0.66
TRIM65-202ENST00000540128 CD79AP11912 226 aa19.2■□□□□ 0.66
TRIM65-202ENST00000540128 CTLA4P16410 223 aa19.2■□□□□ 0.66
TRIM65-202ENST00000540128 CDAP32320 146 aa19.2■□□□□ 0.66
TRIM65-202ENST00000540128 CAPZA2P47755 286 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms