RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 VAPBO95292 243 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 IGKV3-20P01619 116 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CTXN2P0C2S0 81 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 NEFHP12036 1026 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 KITLGP21583 273 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 GATA2P23769 480 aaPredicted RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 LCN1P31025 176 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 RPS5P46782 204 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CSNK1EP49674 416 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 TPMTP51580 245 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PPIL2Q13356 520 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 RAB35Q15286 201 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 MRGPRG-AS1Q2M3A8 158 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 ACTBL2Q562R1 376 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PAGE2BQ5JRK9 111 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CEP170Q5SW79 1584 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 AVPI1Q5T686 147 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 RFLNAQ6ZTI6 216 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 UBQLNLQ8IYU4 475 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 POM121L12Q8N7R1 296 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 OR5M1Q8NGP8 315 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 ACTL9Q8TC94 416 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SLC22A8Q8TCC7 542 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PIFOQ8TCI5 191 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 VN1R17PQ8TDU5 208 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PYROXD1Q8WU10 500 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SMARCD2Q92925 531 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 LRRC45Q96CN5 670 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PAGE5Q96GU1 130 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PPP1R16AQ96I34 528 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 HPDLQ96IR7 371 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 COL21A1Q96P44 957 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SLC38A2Q96QD8 506 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 FMO2Q99518 471 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 RIT2Q99578 217 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 GSDMCQ9BYG8 508 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 UPF3AQ9H1J1 476 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 OR2AG1Q9H205 316 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 VCX2Q9H322 139 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 OR51J1Q9H342 316 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 HAUS4Q9H6D7 363 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 ISYNA1Q9NPH2 558 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 GNG12Q9UBI6 72 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 EIF3KQ9UBQ5 218 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 ADAM28Q9UKQ2 775 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SNX6Q9UNH7 406 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 ABCG2Q9UNQ0 655 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 FADS3Q9Y5Q0 445 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 FBN3Q75N90 2809 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 DENND4CQ5VZ89 1909 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 IFT140Q96RY7 1462 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 ADCY9O60503 1353 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 ANKRD30BQ9BXX2 1392 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 A0A0G2JRQ6 117 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PINLYPA6NC86 204 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 XKRYO14609 159 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 NVLO15381 856 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 GPAA1O43292 621 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 AKR7A2O43488 359 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SRP72O76094 671 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SOX14O95416 240 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 IGHV3-13P01766 116 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 LAMP1P11279 417 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 TOP1P11387 765 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PRPS2P11908 318 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SDC1P18827 310 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 IGHV1-2P23083 117 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 OXTRP30559 389 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CALCRP30988 508 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 RRM2P31350 389 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 NAA10P41227 235 aaPredicted RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CX3CR1P49238 355 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CDH6P55285 790 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CARD18P57730 90 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PSMC5P62195 406 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF45Q02386 682 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 MGAT3Q09327 533 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SCRN3Q0VDG4 424 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CCDC173Q0VFZ6 552 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 MED21Q13503 144 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 MPPED2Q15777 294 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 LPAL2Q16609 132 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PIP5KL1Q5T9C9 394 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 FAM222AQ5U5X8 452 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 OR8G2PQ6IF36 304 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SLC47A2Q86VL8 602 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 MICU2Q8IYU8 434 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CSNK1A1LQ8N752 337 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 OR9K2Q8NGE7 335 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 OR8J2Q8NGG1 315 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 OR4S2Q8NH73 311 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 ZPLD1Q8TCW7 415 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SCFD1Q8WVM8 642 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 FRAT1Q92837 279 aaPredicted RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 RAB1CQ92928 201 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CREB3L1Q96BA8 519 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SLC25A38Q96DW6 304 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 DNAJC1Q96KC8 554 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 OXGR1Q96P68 337 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 OR5M11Q96RB7 305 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms