RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 SETD9Q8NE22 299 aa20.71■□□□□ 0.91
TMEM260-202ENST00000538838 FNDC8Q8TC99 324 aa20.71■□□□□ 0.91
TMEM260-202ENST00000538838 PTP4A1Q93096 173 aa20.71■□□□□ 0.91
TMEM260-202ENST00000538838 SRA1Q9HD15 236 aaKnown RBP20.71■□□□□ 0.91
TMEM260-202ENST00000538838 DNAJC27Q9NZQ0 273 aa20.71■□□□□ 0.91
TMEM260-202ENST00000538838 ZNF587BE7ETH6 402 aa20.71■□□□□ 0.91
TMEM260-202ENST00000538838 SPI1P17947 270 aa20.71■□□□□ 0.91
TMEM260-202ENST00000538838 GABRB1P18505 474 aa20.71■□□□□ 0.91
TMEM260-202ENST00000538838 PYCR1P32322 319 aa20.71■□□□□ 0.91
TMEM260-202ENST00000538838 SLC25A1P53007 311 aa20.71■□□□□ 0.91
TMEM260-202ENST00000538838 CEACAM16Q2WEN9 425 aa20.71■□□□□ 0.91
TMEM260-202ENST00000538838 SLC25A47Q6Q0C1 308 aa20.71■□□□□ 0.91
TMEM260-202ENST00000538838 C8orf59Q8N0T1 100 aaPredicted RBP20.71■□□□□ 0.91
TMEM260-202ENST00000538838 OR51L1Q8NGJ5 315 aa20.71■□□□□ 0.91
TMEM260-202ENST00000538838 TRUB1Q8WWH5 349 aaKnown RBP20.71■□□□□ 0.91
TMEM260-202ENST00000538838 FOXN4Q96NZ1 517 aa20.71■□□□□ 0.91
TMEM260-202ENST00000538838 ANKRD60Q9BZ19 345 aa20.71■□□□□ 0.91
TMEM260-202ENST00000538838 IGLV1-36A0A0B4J1U3 117 aa20.7■□□□□ 0.9
TMEM260-202ENST00000538838 FAM171A2A8MVW0 826 aa20.7■□□□□ 0.9
TMEM260-202ENST00000538838 MSTNO14793 375 aa20.7■□□□□ 0.9
TMEM260-202ENST00000538838 DHHO43323 396 aa20.7■□□□□ 0.9
TMEM260-202ENST00000538838 ZNF133P52736 654 aaPredicted RBP20.7■□□□□ 0.9
TMEM260-202ENST00000538838 SNRPGP62308 76 aaKnown RBP20.7■□□□□ 0.9
TMEM260-202ENST00000538838 MAD2L1BPQ15013 274 aaPredicted RBP20.7■□□□□ 0.9
TMEM260-202ENST00000538838 C10orf128Q5T292 105 aa20.7■□□□□ 0.9
TMEM260-202ENST00000538838 ZNF474Q6S9Z5 364 aaPredicted RBP20.7■□□□□ 0.9
TMEM260-202ENST00000538838 Q6ZT83 130 aa20.7■□□□□ 0.9
TMEM260-202ENST00000538838 ZNRF4Q8WWF5 429 aa20.7■□□□□ 0.9
TMEM260-202ENST00000538838 RBM24Q9BX46 236 aaKnown RBP20.7■□□□□ 0.9
TMEM260-202ENST00000538838 OR51V1Q9H2C8 321 aa20.7■□□□□ 0.9
TMEM260-202ENST00000538838 B9D1Q9UPM9 204 aa20.7■□□□□ 0.9
TMEM260-202ENST00000538838 FKBP7Q9Y680 259 aa20.7■□□□□ 0.9
TMEM260-202ENST00000538838 FLNCQ14315 2725 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 ZG16O60844 167 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 CRABP1P29762 137 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 ISL1P61371 349 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 AADACL4Q5VUY2 407 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 DNM1P34Q6PK57 102 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 MRGPRGQ86SM5 289 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 ZBTB46Q86UZ6 589 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 PROKR2Q8NFJ6 384 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 OR2T4Q8NH00 348 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 RHOXF1Q8NHV9 184 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 CNIH3Q8TBE1 160 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 APH1BQ8WW43 257 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 ASB5Q8WWX0 329 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 HTRA1Q92743 480 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 MYO18BQ8IUG5 2567 aa20.69■□□□□ 0.9
TMEM260-202ENST00000538838 FAM90A27PA6NNH2 459 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 RPL36A-HNRNPH2H7BZ11 118 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 SEC14L2O76054 403 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 CNOT4O95628 575 aaKnown RBP20.68■□□□□ 0.9
TMEM260-202ENST00000538838 ITGA5P08648 1049 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 PLA2G2AP14555 144 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 IGHV1-2P23083 117 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 CDSNQ15517 529 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 KLHL12Q53G59 568 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 NXNL2Q5VZ03 156 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 BEND4Q6ZU67 534 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 ABHD12BQ7Z5M8 362 aaPredicted RBP20.68■□□□□ 0.9
TMEM260-202ENST00000538838 GABRG1Q8N1C3 465 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 FAM26EQ8N5C1 309 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 CNBD2Q96M20 576 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 RACGAP1Q9H0H5 632 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 JKAMPQ9P055 326 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 COA3Q9Y2R0 106 aaPredicted RBP20.68■□□□□ 0.9
TMEM260-202ENST00000538838 UGT2A1Q9Y4X1 527 aa20.68■□□□□ 0.9
TMEM260-202ENST00000538838 A0A1W2PPL8 197 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 A8MXE2 369 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 MPZL2O60487 215 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 KHDRBS3O75525 346 aaKnown RBP20.67■□□□□ 0.9
TMEM260-202ENST00000538838 GPANK1O95872 356 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 SLC2A5P22732 501 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 MYF6P23409 242 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 CDAP32320 146 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 CENPAP49450 140 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 APOFQ13790 326 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 ZNF582Q96NG8 517 aaPredicted RBP20.67■□□□□ 0.9
TMEM260-202ENST00000538838 HSPE1-MOB4S4R3N1 261 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 ENTPD6O75354 484 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 MPGP29372 298 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 ZNF84P51523 738 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 RPS7P62081 194 aaKnown RBP20.67■□□□□ 0.9
TMEM260-202ENST00000538838 LYPD4Q6UWN0 246 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 THAP5Q7Z6K1 395 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 OR6K6Q8NGW6 343 aa20.67■□□□□ 0.9
TMEM260-202ENST00000538838 CCDC182A6NF36 153 aa20.66■□□□□ 0.9
TMEM260-202ENST00000538838 ZNF99A8MXY4 864 aaPredicted RBP20.66■□□□□ 0.9
TMEM260-202ENST00000538838 PRODHO43272 600 aa20.66■□□□□ 0.9
TMEM260-202ENST00000538838 WBP4O75554 376 aaKnown RBP20.66■□□□□ 0.9
TMEM260-202ENST00000538838 LYZL6O75951 148 aa20.66■□□□□ 0.9
TMEM260-202ENST00000538838 COX5AP20674 150 aa20.66■□□□□ 0.9
TMEM260-202ENST00000538838 ARF1P84077 181 aaKnown RBP20.66■□□□□ 0.9
TMEM260-202ENST00000538838 TSC22D1Q15714 1073 aa20.66■□□□□ 0.9
TMEM260-202ENST00000538838 SLC25A35Q3KQZ1 300 aa20.66■□□□□ 0.9
TMEM260-202ENST00000538838 OTPQ5XKR4 325 aa20.66■□□□□ 0.9
TMEM260-202ENST00000538838 B3GLCTQ6Y288 498 aa20.66■□□□□ 0.9
TMEM260-202ENST00000538838 CXorf67Q86X51 503 aaPredicted RBP20.66■□□□□ 0.9
TMEM260-202ENST00000538838 CA5BP1Q8WTZ4 195 aa20.66■□□□□ 0.9
TMEM260-202ENST00000538838 ITLN2Q8WWU7 325 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms