RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 B4GALT1P15291 398 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 FPR3P25089 353 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 PTH2RP49190 550 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 CDH11P55287 796 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 FOXD4Q12950 439 aaPredicted RBP11.89□□□□□ -0.51
CD9-208ENST00000538834 SWI5Q1ZZU3 235 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 DNAL1Q4LDG9 190 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 MESTQ5EB52 335 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 FGD3Q5JSP0 725 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 THEM4Q5T1C6 240 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 SHEQ5VZ18 495 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 RRM2BQ7LG56 351 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 PAPD5Q8NDF8 572 aaKnown RBP11.89□□□□□ -0.51
CD9-208ENST00000538834 NUP37Q8NFH4 326 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 IL17RDQ8NFM7 739 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 OR52J3Q8NH60 311 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 MCUR1Q96AQ8 359 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 CADM1Q9BY67 442 aaKnown RBP11.89□□□□□ -0.51
CD9-208ENST00000538834 VNN3Q9NY84 501 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 MOKQ9UQ07 419 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 ADAM18Q9Y3Q7 739 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 IGHV2OR16-5A0A0B4J2B6 119 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 TCRBV3S1A0A5B6 114 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 A6NIZ1 184 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 ATP6V1G2-DDX39BF2Z307 99 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 ARPC3O15145 178 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 NDUFB2O95178 105 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 APOBEC3AP31941 199 aaPredicted RBP11.88□□□□□ -0.51
CD9-208ENST00000538834 ACVR1BP36896 505 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 CLRN1P58418 232 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 RAP1BP61224 184 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 RAB1AP62820 205 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 RAP1AP62834 184 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 MYBPC1Q00872 1141 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 SPIBQ01892 262 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 FMODQ06828 376 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 TSPAN31Q12999 210 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 GK3PQ14409 553 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 GSG1Q2KHT4 349 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 FAM27BQ5VT28 67 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 PGBD2Q6P3X8 592 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 SLC22A25Q6T423 547 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 DPY19L2P2Q6ZN68 376 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 DPPA2Q7Z7J5 298 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 IGFN1Q86VF2 1251 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 PIAS4Q8N2W9 510 aaPredicted RBP11.88□□□□□ -0.51
CD9-208ENST00000538834 CLDN22Q8N7P3 220 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 SYT14Q8NB59 555 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 WFDC11Q8NEX6 87 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 TMEM171Q8WVE6 324 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 RSRC1Q96IZ7 334 aaKnown RBP11.88□□□□□ -0.51
CD9-208ENST00000538834 Q96M85 177 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 DDOQ99489 341 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 SIAEQ9HAT2 523 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 VSX1Q9NZR4 365 aaPredicted RBP11.88□□□□□ -0.51
CD9-208ENST00000538834 LAMP3Q9UQV4 416 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 POMPQ9Y244 141 aa11.88□□□□□ -0.51
CD9-208ENST00000538834 TLN2Q9Y4G6 2542 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 ABCA1O95477 2261 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 SLC22A23A1A5C7 686 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 UNC119BA6NIH7 251 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 IMPA2O14732 288 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 GYG2O15488 501 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 SMPD2O60906 423 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 DNAJC8O75937 253 aaPredicted RBP11.87□□□□□ -0.51
CD9-208ENST00000538834 UBL3O95164 117 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 SLC2A10O95528 541 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 TP53P04637 393 aaPredicted RBP11.87□□□□□ -0.51
CD9-208ENST00000538834 SERPINA5P05154 406 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 RAP2AP10114 183 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 HOXB6P17509 224 aaKnown RBP11.87□□□□□ -0.51
CD9-208ENST00000538834 SDHAP31040 664 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 ERVK-25P63136 954 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 RFX4Q33E94 735 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 ZNF362Q5T0B9 420 aaPredicted RBP11.87□□□□□ -0.51
CD9-208ENST00000538834 GPR139Q6DWJ6 353 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 OR2T5Q6IEZ7 315 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 SMARCD3Q6STE5 483 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 LINC00471Q8N535 108 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 OR4F15Q8NGB8 312 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 OR2T29Q8NH02 315 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 CANT1Q8WVQ1 401 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 SNX18Q96RF0 628 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 CXorf56Q9H5V9 222 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 ZNF442Q9H7R0 627 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 CBLN4Q9NTU7 201 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 IL20Q9NYY1 176 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 SLC7A8Q9UHI5 535 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 CSPG4Q6UVK1 2322 aa11.87□□□□□ -0.51
CD9-208ENST00000538834 TMEM129A0AVI4 362 aa11.86□□□□□ -0.51
CD9-208ENST00000538834 PRSS37A4D1T9 235 aa11.86□□□□□ -0.51
CD9-208ENST00000538834 H7C417 338 aa11.86□□□□□ -0.51
CD9-208ENST00000538834 ENTPD5O75356 428 aa11.86□□□□□ -0.51
CD9-208ENST00000538834 CRYAAP02489 173 aa11.86□□□□□ -0.51
CD9-208ENST00000538834 SCG5P05408 212 aa11.86□□□□□ -0.51
CD9-208ENST00000538834 IGFBP1P08833 259 aaPredicted RBP11.86□□□□□ -0.51
CD9-208ENST00000538834 PATE4P0C8F1 98 aa11.86□□□□□ -0.51
CD9-208ENST00000538834 NR2C1P13056 603 aa11.86□□□□□ -0.51
CD9-208ENST00000538834 NPR2P20594 1047 aa11.86□□□□□ -0.51
CD9-208ENST00000538834 NR4A1P22736 598 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms