RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 ZNF250P15622 560 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 ACADSP16219 412 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 PCMT1P22061 227 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 AQP2P41181 271 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 UGT2B15P54855 530 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 UCP2P55851 309 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 CLRN1P58418 232 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 CCL8P80075 99 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 MRPS11P82912 194 aaKnown RBP7.22□□□□□ -1.25
USP28-203ENST00000537490 RPL18Q07020 188 aaKnown RBP7.22□□□□□ -1.25
USP28-203ENST00000537490 NKPD1Q17RQ9 610 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 SLC36A2Q495M3 483 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 AVPI1Q5T686 147 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 INTS11Q5TA45 600 aaKnown RBP7.22□□□□□ -1.25
USP28-203ENST00000537490 NANOGP8Q6NSW7 305 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 DEF8Q6ZN54 512 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 NANOGNBQ7Z5D8 188 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 DPPA2Q7Z7J5 298 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 SLC30A8Q8IWU4 369 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 LRRC18Q8N456 261 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 SYT14Q8NB59 555 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 CPEB3Q8NE35 698 aaKnown RBP7.22□□□□□ -1.25
USP28-203ENST00000537490 NOXO1Q8NFA2 376 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 MOSPD2Q8NHP6 518 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 PFN4Q8NHR9 129 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 ZNF519Q8TB69 540 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 SYNPRQ8TBG9 265 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 TSPEARQ8WU66 669 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 TMEM255BQ8WV15 326 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 ASB10Q8WXI3 467 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 C11orf40Q8WZ69 217 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 LRRC37BQ96QE4 947 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 SEPHS2Q99611 448 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 ZNF416Q9BWM5 594 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 NANOGQ9H9S0 305 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 HINT3Q9NQE9 182 aaKnown RBP7.22□□□□□ -1.25
USP28-203ENST00000537490 C20orf141Q9NUB4 165 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 TRIM33Q9UPN9 1127 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 SH3GLB1Q9Y371 365 aa7.22□□□□□ -1.25
USP28-203ENST00000537490 IGKV1D-43A0A0B4J1Z2 117 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 IQCMA0A1B0GVH7 501 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 A0A1W2PRG6 482 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 EDF1O60869 148 aaKnown RBP7.21□□□□□ -1.26
USP28-203ENST00000537490 SLC2A10O95528 541 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 SNAP29O95721 258 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 AVPP01185 164 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 PTHP01270 115 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 MT-ND1P03886 318 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 CDAP32320 146 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 RAD52P43351 418 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 ZNF84P51523 738 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 ZNF133P52736 654 aaPredicted RBP7.21□□□□□ -1.26
USP28-203ENST00000537490 KLF3P57682 345 aaPredicted RBP7.21□□□□□ -1.26
USP28-203ENST00000537490 SELENOVP59797 346 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 MVKQ03426 396 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 PLP2Q04941 152 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 PIN1Q13526 163 aaPredicted RBP7.21□□□□□ -1.26
USP28-203ENST00000537490 LAPTM4AQ15012 233 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 TBC1D28Q2M2D7 210 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 NRN1LQ496H8 165 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 RABL3Q5HYI8 236 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 PABPC1L2AQ5JQF8 200 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 ARMC4Q5T2S8 1044 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 FAHD2BQ6P2I3 314 aaPredicted RBP7.21□□□□□ -1.26
USP28-203ENST00000537490 TMEM154Q6P9G4 183 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 THSD4Q6ZMP0 1018 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 C1orf229Q6ZS94 237 aaPredicted RBP7.21□□□□□ -1.26
USP28-203ENST00000537490 CALHM3Q86XJ0 350 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 MEX3DQ86XN8 651 aaKnown RBP7.21□□□□□ -1.26
USP28-203ENST00000537490 ICA1LQ8NDH6 482 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 RBM15BQ8NDT2 890 aaKnown RBP7.21□□□□□ -1.26
USP28-203ENST00000537490 OR1J2Q8NGS2 313 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 OR1J1Q8NGS3 322 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 OR51F2Q8NH61 342 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 HDAC2Q92769 488 aaKnown RBP7.21□□□□□ -1.26
USP28-203ENST00000537490 NMD3Q96D46 503 aaKnown RBP7.21□□□□□ -1.26
USP28-203ENST00000537490 SGTBQ96EQ0 304 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 FAHD2AQ96GK7 314 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 MAGEB18Q96M61 343 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 BCL2L14Q9BZR8 327 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 C1orf198Q9H425 327 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 NPHS2Q9NP85 383 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 INIPQ9NRY2 104 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 SLCO1C1Q9NYB5 712 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 NKIRAS2Q9NYR9 191 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 GPR160Q9UJ42 338 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 RIMS3Q9UJD0 308 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 GRIP1Q9Y3R0 1128 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 UGT2A1Q9Y4X1 527 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 CACNG2Q9Y698 323 aa7.21□□□□□ -1.26
USP28-203ENST00000537490 SVEP1Q4LDE5 3571 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 LOC100509620A0A075B734 347 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 A0A0A6YYJ9 748 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 IGHV1-69-2A0A0G2JMI3 117 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 A0A0G2JND7 137 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 CENPBD1B2RD01 187 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 MCIDASD6RGH6 385 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 FXYD1O00168 92 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 MGRN1O60291 552 aa7.2□□□□□ -1.26
USP28-203ENST00000537490 DEAF1O75398 565 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms