RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 MKL2Q9ULH7 1088 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 WDR87Q6ZQQ6 2873 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 KIF26BQ2KJY2 2108 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 A0A1W2PQD3 144 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 ANKRD20A5PA0PJZ0 165 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 RAF1P04049 648 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 TMIGD3P0DMS9 266 aaPredicted RBP11.89□□□□□ -0.51
LDLR-203ENST00000535915 ENPP1P22413 925 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 IL32P24001 234 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 ABCD3P28288 659 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 LCN1P31025 176 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 TAS2R20P59543 309 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 FAAP20Q6NZ36 180 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 SLC35D2Q76EJ3 337 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 ZNF227Q86WZ6 799 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 TSEN15Q8WW01 171 aaKnown RBP11.89□□□□□ -0.51
LDLR-203ENST00000535915 DCBLD2Q96PD2 775 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 PTTG3PQ9NZH4 202 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 GTF2A1LQ9UNN4 478 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 CABIN1Q9Y6J0 2220 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 H0YC42 278 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 ACOT7O00154 380 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 ARPC1BO15143 372 aaKnown RBP11.88□□□□□ -0.51
LDLR-203ENST00000535915 SUSD5O60279 629 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 OR6A2O95222 327 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 FOLR1P15328 257 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 PRKACAP17612 351 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 IGFBP4P22692 258 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 DNASE1P24855 282 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 ACKR1Q16570 336 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 MEP1BQ16820 701 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 CDH24Q86UP0 819 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 ATOH1Q92858 354 aaPredicted RBP11.88□□□□□ -0.51
LDLR-203ENST00000535915 DPYSL5Q9BPU6 564 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 DLL4Q9NR61 685 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 B9D1Q9UPM9 204 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 IGHV1OR21-1A0A087WYE8 117 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 TRBV5-7A0A0A0MS05 114 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 TMED7-TICAM2A0A0A6YYA0 188 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 PRSS37A4D1T9 235 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 PRAF2O60831 178 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 MT-ATP6P00846 226 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 NAT2P11245 290 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 DCTDP32321 178 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 KIR3DL2P43630 455 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 CSNK1EP49674 416 aaKnown RBP11.88□□□□□ -0.51
LDLR-203ENST00000535915 PER3P56645 1201 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 ZP1P60852 638 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 RPL27P61353 136 aaKnown RBP11.88□□□□□ -0.51
LDLR-203ENST00000535915 DMWDQ09019 674 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 CAMK2DQ13557 499 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 UBXN2BQ14CS0 331 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 SGCBQ16585 318 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 WDR38Q5JTN6 314 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 ELFN2Q5R3F8 820 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 ZBTB37Q5TC79 503 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 SLC25A25Q6KCM7 469 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 PLXDC1Q8IUK5 500 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 OR1N1Q8NGS0 311 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 C15orf40Q8WUR7 153 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 HGDQ93099 445 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 C4orf45Q96LM5 186 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 PTDSS2Q9BVG9 487 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 ZNF436Q9C0F3 470 aaPredicted RBP11.88□□□□□ -0.51
LDLR-203ENST00000535915 ELOVL3Q9HB03 270 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 NOX3Q9HBY0 568 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 EMC3Q9P0I2 261 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 TMED7Q9Y3B3 224 aa11.88□□□□□ -0.51
LDLR-203ENST00000535915 TO15178 435 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 SLC16A7O60669 478 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 TGM6O95932 706 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 POLR2HP52434 150 aaKnown RBP11.87□□□□□ -0.51
LDLR-203ENST00000535915 PNLIPRP2P54317 469 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 NXPH1P58417 271 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 PLA2G7Q13093 441 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 COL19A1Q14993 1142 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 METTL11BQ5VVY1 283 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 FAM122CQ6P4D5 195 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 GLTPQ9NZD2 209 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 STEAP1Q9UHE8 339 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 SCP2D1Q9UJQ7 156 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 HSPB2A8KAH6 182 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 DUX1O43812 170 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 RAD1O60671 282 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 LDOC1O95751 146 aaPredicted RBP11.87□□□□□ -0.51
LDLR-203ENST00000535915 PDGFAP04085 211 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 SPARCP09486 303 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 CCKBRP32239 447 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 SELENOPP49908 381 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 CFHR1Q03591 330 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 TDGQ13569 410 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 HSPB2Q16082 182 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 TEX261Q6UWH6 196 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 Q6ZTK2 550 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 GLB1L2Q8IW92 636 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 CADM4Q8NFZ8 388 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 OR2T35Q8NGX2 323 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 OR8B4Q96RC9 309 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 VN1R1Q9GZP7 353 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 METTL17Q9H7H0 456 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms