RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 GABARAPL1Q9H0R8 117 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 ZNF556Q9HAH1 456 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 SMURF2Q9HAU4 748 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 TBC1D23Q9NUY8 699 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 ZNF226Q9NYT6 803 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 OAZ3Q9UMX2 235 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 POFUT2Q9Y2G5 429 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 SLC25A15Q9Y619 301 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 SAC3D1A6NKF1 404 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 SIAH2O43255 324 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 IDH3BO43837 385 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 B4GALT1P15291 398 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 HIST1H1CP16403 213 aaKnown RBP10.56□□□□□ -0.72
CHD4-203ENST00000535717 CRYGSP22914 178 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 CDKN2AP42771 156 aaKnown RBP10.56□□□□□ -0.72
CHD4-203ENST00000535717 PPA1Q15181 289 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 THEM4Q5T1C6 240 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 SLC35F1Q5T1Q4 408 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 C10orf128Q5T292 105 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 ADCK1Q86TW2 530 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 DRAXINQ8NBI3 349 aaPredicted RBP10.56□□□□□ -0.72
CHD4-203ENST00000535717 ICA1LQ8NDH6 482 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 OR4Q3Q8NH05 313 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 NSMAFQ92636 917 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 STMN2Q93045 179 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 MUCL1Q96DR8 90 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 RBP7Q96R05 134 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 FOXB1Q99853 325 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 VSX1Q9NZR4 365 aaPredicted RBP10.56□□□□□ -0.72
CHD4-203ENST00000535717 KIF17Q9P2E2 1029 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 UGT2A1Q9Y4X1 527 aa10.56□□□□□ -0.72
CHD4-203ENST00000535717 ABCA4P78363 2273 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 A6NNC1 897 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 DEFB108AA8MXU0 73 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 H3BN98 237 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 MITFO75030 526 aaPredicted RBP10.55□□□□□ -0.72
CHD4-203ENST00000535717 NR2C1P13056 603 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 OSMP13725 252 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 PRF1P14222 555 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 POU1F1P28069 291 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 NOS3P29474 1203 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 TUBA1BP68363 451 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 TUBA4AP68366 448 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 KDM4DQ6B0I6 523 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 KLHL24Q6TFL4 600 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 ZNF813Q6ZN06 617 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 TUBA1AQ71U36 451 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 PQLC1Q8N2U9 271 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 LNX2Q8N448 690 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 IQCF1Q8N6M8 205 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 OR2T33Q8NG76 320 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 OR4K13Q8NH42 304 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 TEX47Q8TBZ9 253 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 FNDC8Q8TC99 324 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 DNAJC9Q8WXX5 260 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 HTRA1Q92743 480 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 C14orf79Q96F83 325 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 NMNAT3Q96T66 252 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 SYT4Q9H2B2 425 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 PAPOLBQ9NRJ5 636 aaKnown RBP10.55□□□□□ -0.72
CHD4-203ENST00000535717 TMEM38BQ9NVV0 291 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 NPAP1Q9NZP6 1156 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 AMDHD2Q9Y303 409 aa10.55□□□□□ -0.72
CHD4-203ENST00000535717 ARPC4-TTLL3A0A0A6YYG9 625 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 FAM221AA4D161 298 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 ZNF503-AS2A6NEH8 195 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 CTAG2O75638 210 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 BAG2O95816 211 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 HOXB1P14653 301 aaPredicted RBP10.54□□□□□ -0.72
CHD4-203ENST00000535717 CTLA4P16410 223 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 LOXP28300 417 aaPredicted RBP10.54□□□□□ -0.72
CHD4-203ENST00000535717 HOXC12P31275 282 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 CDAP32320 146 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 GIPRP48546 466 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 ZNF84P51523 738 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 UBE2NP61088 152 aaKnown RBP10.54□□□□□ -0.72
CHD4-203ENST00000535717 TLE4Q04727 773 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.54□□□□□ -0.72
CHD4-203ENST00000535717 DBPQ10586 325 aaPredicted RBP10.54□□□□□ -0.72
CHD4-203ENST00000535717 GINS1Q14691 196 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 ETFDHQ16134 617 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 ZNF362Q5T0B9 420 aaPredicted RBP10.54□□□□□ -0.72
CHD4-203ENST00000535717 LEG1Q6P5S2 330 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 SSX8Q7RTT4 187 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 JAZF1Q86VZ6 243 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 SKA3Q8IX90 412 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 PARP8Q8N3A8 854 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 SLC22A24Q8N4F4 322 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 NPEPL1Q8NDH3 523 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 SDR9C7Q8NEX9 313 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 OR52E2Q8NGJ4 325 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 CIB1Q99828 191 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 C1QTNF6Q9BXI9 259 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 OBP2BQ9NPH6 170 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 KRT84Q9NSB2 600 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 ZNF224Q9NZL3 707 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 TMEFF2Q9UIK5 374 aaPredicted RBP10.54□□□□□ -0.72
CHD4-203ENST00000535717 BAIAP2Q9UQB8 552 aa10.54□□□□□ -0.72
CHD4-203ENST00000535717 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.53□□□□□ -0.72
CHD4-203ENST00000535717 OR6C68A6NDL8 312 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms