RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 HNRNPCL2B2RXH8 293 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 SHISA9B4DS77 424 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 HNRNPCL3B7ZW38 293 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 C5orf58C9J3I9 102 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 M0R1B8 84 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 CLIC1O00299 241 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 NR5A2O00482 541 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 FRS3O43559 492 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 PRSS23O95084 383 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 ITGA5P08648 1049 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 HNRNPCL4P0DMR1 293 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 IL7P13232 177 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 PRG2P13727 222 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 PRKACAP17612 351 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 CDKN1AP38936 164 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 ACAA2P42765 397 aaKnown RBP7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 ZNF83P51522 516 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 MAP2K6P52564 334 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 FOXG1P55316 489 aaPredicted RBP7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 H3F3AP84243 136 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 VEZF1Q14119 521 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 SLC17A1Q14916 467 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 RGNQ15493 299 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 ZSWIM7Q19AV6 140 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 RFX4Q33E94 735 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 KRTAP21-3Q3LHN1 58 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 C6orf141Q5SZD1 244 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 STEAP3Q658P3 488 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 REP15Q6BDI9 236 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 SSX8Q7RTT4 187 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 SERPINA11Q86U17 422 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 GPAT4Q86UL3 456 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 PIAS4Q8N2W9 510 aaPredicted RBP7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 TMEM99Q8N816 258 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 OR5H6Q8NGV6 325 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 BBS10Q8TAM1 723 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 CANT1Q8WVQ1 401 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 FCGR1BQ92637 280 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 RPL3LQ92901 407 aaKnown RBP7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 TRMT61AQ96FX7 289 aaKnown RBP7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 SPATA9Q9BWV2 254 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 TRIM2Q9C040 744 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 ALG2Q9H553 416 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 CCNB1IP1Q9NPC3 277 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 DDX28Q9NUL7 540 aaKnown RBP7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 CISD1Q9NZ45 108 aaKnown RBP7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 CCDC167Q9P0B6 97 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 KLHL21Q9UJP4 597 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 OAZ3Q9UMX2 235 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 AP3M1Q9Y2T2 418 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 NDUFAF1Q9Y375 327 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 CHST2Q9Y4C5 530 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 PEX16Q9Y5Y5 336 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 PMF1-BGLAPU3KQ54 211 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 ZFHX3Q15911 3703 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 FLNAP21333 2647 aaKnown RBP7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 USF3Q68DE3 2245 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 AQP7P3A6NL99 342 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 A8MVM7 634 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 OVOL3O00110 214 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 CTDSP2O14595 271 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 EI24O14681 340 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 MRASO14807 208 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 OR7A10O76100 309 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 AHSA1O95433 338 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 HMGN1P05114 100 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 DANCRP0C864 163 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 THRBP10828 461 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 HOXB9P17482 250 aaPredicted RBP7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 PTNP21246 168 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 MRPL19P49406 292 aaKnown RBP7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 NKX2-5P52952 324 aaPredicted RBP7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 BLVRAP53004 296 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 HOXC5Q00444 222 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 SPOCK1Q08629 439 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 GPR50Q13585 617 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 DAG1Q14118 895 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 GABRA6Q16445 453 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 CLEC12BQ2HXU8 276 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 PGGHGQ32M88 737 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 ZNF404Q494X3 552 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 PAGE3Q5JUK9 113 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 GCNT6Q5T4J0 391 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 TSPO2Q5TGU0 170 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 C1orf140Q5VVS0 124 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 PRAMEF8Q5VWM4 474 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 PRAMEF7Q5VXH5 474 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 TMEM225Q6GV28 225 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 OR7E24Q6IFN5 339 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 SLC22A25Q6T423 547 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 KLHL17Q6TDP4 642 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 TMEM108Q6UXF1 575 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 ZNF782Q6ZMW2 699 aaPredicted RBP7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 GDPD3Q7L5L3 318 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 AAED1Q7RTV5 226 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 PIWIL3Q7Z3Z3 882 aaKnown RBP7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 FUNDC1Q8IVP5 155 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 OR9K2Q8NGE7 335 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 MCFD2Q8NI22 146 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 NFKBIDQ8NI38 313 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms