RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 FAM157BP0CG42 384 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 CPN1P15169 458 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 POU3F2P20265 443 aaPredicted RBP11.02□□□□□ -0.65
SCARB1-204ENST00000535005 LHX2P50458 406 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 FOXD4Q12950 439 aaPredicted RBP11.02□□□□□ -0.65
SCARB1-204ENST00000535005 TMEM176BQ3YBM2 270 aaPredicted RBP11.02□□□□□ -0.65
SCARB1-204ENST00000535005 HACD4Q5VWC8 232 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 C1QL3Q5VWW1 255 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 PGBD2Q6P3X8 592 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 MZT2AQ6P582 158 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 ESPNLQ6ZVH7 1005 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 PRICKLE2Q7Z3G6 844 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 ZER1Q7Z7L7 766 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 MFSD8Q8NHS3 518 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 PIGXQ8TBF5 258 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 AKAP1Q92667 903 aaKnown RBP eCLIP11.02□□□□□ -0.651e-7■■■■□ 21.7
SCARB1-204ENST00000535005 SNRNP40Q96DI7 357 aaKnown RBP11.02□□□□□ -0.65
SCARB1-204ENST00000535005 KTI12Q96EK9 354 aaPredicted RBP11.02□□□□□ -0.65
SCARB1-204ENST00000535005 KLHL15Q96M94 604 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 GPR137Q96N19 417 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 CITED4Q96RK1 184 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 PTDSS2Q9BVG9 487 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 OR11A1Q9GZK7 315 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 KRCC1Q9NPI7 259 aaPredicted RBP11.02□□□□□ -0.65
SCARB1-204ENST00000535005 SPRR3Q9UBC9 169 aa11.02□□□□□ -0.65
SCARB1-204ENST00000535005 LEUTXA8MZ59 168 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 FTCDNL1E5RQL4 147 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 H3BML4 177 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 KLF4O43474 513 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 WISP2O76076 250 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 AHSA1O95433 338 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 TFPIP10646 304 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 SLC2A2P11168 524 aaPredicted RBP11.01□□□□□ -0.65
SCARB1-204ENST00000535005 IFI30P13284 250 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 ZNF708P17019 499 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 SHC1P29353 583 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 STARP49675 285 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 CLDN18P56856 261 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 ZNF91Q05481 1191 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 CRYZQ08257 329 aaKnown RBP11.01□□□□□ -0.65
SCARB1-204ENST00000535005 BAMBIQ13145 260 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 HNRNPA0Q13151 305 aaKnown RBP11.01□□□□□ -0.65
SCARB1-204ENST00000535005 TPBGQ13641 420 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 KLHL22Q53GT1 634 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 FAM69AQ5T7M9 428 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 ZBTB37Q5TC79 503 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 CASP12Q6UXS9 341 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 GGNQ86UU5 652 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 CDK20Q8IZL9 346 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 FAM26EQ8N5C1 309 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 OR9Q2Q8NGE9 314 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 PFN4Q8NHR9 129 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 GNPDA2Q8TDQ7 276 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 TAAR8Q969N4 342 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 MIB2Q96AX9 1013 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 BPIFA2Q96DR5 249 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 SGTBQ96EQ0 304 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 ADGRG7Q96K78 797 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 ARL5BQ96KC2 179 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 DCLRE1CQ96SD1 692 aaKnown RBP11.01□□□□□ -0.65
SCARB1-204ENST00000535005 TIMP4Q99727 224 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 TSPAN10Q9H1Z9 355 aaPredicted RBP11.01□□□□□ -0.65
SCARB1-204ENST00000535005 PPP1R3EQ9H7J1 279 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 C20orf141Q9NUB4 165 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 MRPS18AQ9NVS2 196 aaKnown RBP11.01□□□□□ -0.65
SCARB1-204ENST00000535005 ZNF407Q9C0G0 2248 aa11.01□□□□□ -0.65
SCARB1-204ENST00000535005 MED12Q93074 2177 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 A0A0J9YW62 118 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 FAM240BA0A1B0GVZ2 78 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 TMEM129A0AVI4 362 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 OR14I1A6ND48 311 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 SNTNA6NMZ2 147 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 LYRM1O43325 122 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 PIP5K1CO60331 668 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 SLC19A2O60779 497 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 PMS2P2O95744 297 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 MT-ATP6P00846 226 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 GASTP01350 101 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 BGLAPP02818 100 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 NAT1P18440 290 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 GALP22466 123 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 FPR3P25089 353 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 TDGF1P3P51864 188 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 CLDN15P56746 228 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 LTBQ06643 244 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 MYBPHQ13203 477 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 MFSD13AQ14CX5 517 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 ZNF74Q16587 644 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 ARHGAP11AQ6P4F7 1023 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 CD300LDQ6UXZ3 194 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 TMPPEQ6ZT21 453 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 CDH24Q86UP0 819 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 ATP6V1C2Q8NEY4 427 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 KCNJ15Q99712 375 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 RANBP3Q9H6Z4 567 aaPredicted RBP11□□□□□ -0.65
SCARB1-204ENST00000535005 EXO5Q9H790 373 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 TMEM185BQ9H7F4 350 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 EMC7Q9NPA0 242 aa11□□□□□ -0.65
SCARB1-204ENST00000535005 ELF5Q9UKW6 265 aaPredicted RBP11□□□□□ -0.65
SCARB1-204ENST00000535005 ING4Q9UNL4 249 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms