RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 ARPC4-TTLL3A0A0A6YYG9 625 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 A0A1W2PPL8 197 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 A6NIZ1 184 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 ANKRD65E5RJM6 399 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 H3BNX3 289 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 GPANK1O95872 356 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 CD79AP11912 226 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 CTLA4P16410 223 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 CD40P25942 277 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 CDKN2AP42771 156 aaKnown RBP12.22□□□□□ -0.45
VPS11-205ENST00000534551 ZNF133P52736 654 aaPredicted RBP12.22□□□□□ -0.45
VPS11-205ENST00000534551 ACTR3P61158 418 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 RAP1BP61224 184 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 RAP1AP62834 184 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 PIGFQ07326 219 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 TAF11Q15544 211 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 ATP6AP1Q15904 470 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 C10orf128Q5T292 105 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 FAM205BPQ63HN1 556 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 SLC25A47Q6Q0C1 308 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 DPY19L2P2Q6ZN68 376 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 HDDC2Q7Z4H3 204 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 SKA3Q8IX90 412 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 PIAS4Q8N2W9 510 aaPredicted RBP12.22□□□□□ -0.45
VPS11-205ENST00000534551 LILRB1Q8NHL6 650 aaPredicted RBP12.22□□□□□ -0.45
VPS11-205ENST00000534551 NABP1Q96AH0 204 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 MS4A3Q96HJ5 214 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 TSSK2Q96PF2 358 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 TMEM204Q9BSN7 226 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 SEMA6AQ9H2E6 1030 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 RERGLQ9H628 205 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 DENND2DQ9H6A0 471 aaPredicted RBP12.22□□□□□ -0.45
VPS11-205ENST00000534551 RNF115Q9Y4L5 304 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 NAV2Q8IVL1 2488 aa12.22□□□□□ -0.45
VPS11-205ENST00000534551 TEX15Q9BXT5 2789 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 SLC22A23A1A5C7 686 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 PRSS37A4D1T9 235 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 ARRDC5A6NEK1 342 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 SHISA9B4DS77 424 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 ATP6V1G2-DDX39BF2Z307 99 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 DCTN6O00399 190 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 XKRYO14609 159 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 SCG5P05408 212 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 CD3EP07766 207 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 CECR9P0C854 216 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 HIST1H1CP16403 213 aaKnown RBP12.21□□□□□ -0.45
VPS11-205ENST00000534551 RPS6KA3P51812 740 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 NR1H2P55055 460 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 SLC35F1Q5T1Q4 408 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 LEG1Q6P5S2 330 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 RASSF6Q6ZTQ3 369 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 ZNF627Q7L945 461 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 CDH24Q86UP0 819 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 LRRC18Q8N456 261 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 SLC22A24Q8N4F4 322 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 OR4K13Q8NH42 304 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 AKAP1Q92667 903 aaKnown RBP eCLIP12.21□□□□□ -0.45
VPS11-205ENST00000534551 DUS3LQ96G46 650 aaKnown RBP12.21□□□□□ -0.45
VPS11-205ENST00000534551 BOD1Q96IK1 185 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 NMNAT3Q96T66 252 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 USB1Q9BQ65 265 aaKnown RBP12.21□□□□□ -0.45
VPS11-205ENST00000534551 DGCR6LQ9BY27 220 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 NDEL1Q9GZM8 345 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 ESRP2Q9H6T0 727 aaKnown RBP12.21□□□□□ -0.45
VPS11-205ENST00000534551 YY1AP1Q9H869 796 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 STX18Q9P2W9 335 aaKnown RBP12.21□□□□□ -0.45
VPS11-205ENST00000534551 MGAT4BQ9UQ53 548 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 AP4S1Q9Y587 144 aa12.21□□□□□ -0.45
VPS11-205ENST00000534551 RTTNQ86VV8 2226 aa12.21□□□□□ -0.46
VPS11-205ENST00000534551 CENPBD1B2RD01 187 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 BHLHE40O14503 412 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 DEAF1O75398 565 aaPredicted RBP12.2□□□□□ -0.46
VPS11-205ENST00000534551 GOSR1O95249 250 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 TXNDC12O95881 172 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 WNT11O96014 354 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 CALCRP30988 508 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 GIPRP48546 466 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 PTDSS1P48651 473 aaKnown RBP12.2□□□□□ -0.46
VPS11-205ENST00000534551 ZNF84P51523 738 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 CDH11P55287 796 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 SLC36A3Q495N2 470 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 GPR139Q6DWJ6 353 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 SHQ1Q6PI26 577 aaKnown RBP12.2□□□□□ -0.46
VPS11-205ENST00000534551 UGT2A3Q6UWM9 527 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 PAMR1Q6UXH9 720 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 LINC00471Q8N535 108 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 CYB561A3Q8NBI2 242 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 OR52L1Q8NGH7 329 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 SLC38A2Q96QD8 506 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 TSSK6Q9BXA6 273 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 EMC7Q9NPA0 242 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 NGBQ9NPG2 151 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 B3GNT2Q9NY97 397 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 REV1Q9UBZ9 1251 aa12.2□□□□□ -0.46
VPS11-205ENST00000534551 SAC3D1A6NKF1 404 aa12.19□□□□□ -0.46
VPS11-205ENST00000534551 FAM171A2A8MVW0 826 aa12.19□□□□□ -0.46
VPS11-205ENST00000534551 ENTPD5O75356 428 aa12.19□□□□□ -0.46
VPS11-205ENST00000534551 MPZL1O95297 269 aa12.19□□□□□ -0.46
VPS11-205ENST00000534551 IGKV3-15P01624 115 aa12.19□□□□□ -0.46
VPS11-205ENST00000534551 IGLV1-44P01699 117 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms