RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 MT-ND1P03886 318 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 RHCEP18577 417 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 USF1P22415 310 aaPredicted RBP9.78□□□□□ -0.84
CLCF1-202ENST00000533438 FASP25445 335 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 THBS4P35443 961 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 NR4A2P43354 598 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 LSM11P83369 360 aaKnown RBP eCLIP9.78□□□□□ -0.84
CLCF1-202ENST00000533438 NPRL3Q12980 569 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 CAMK2DQ13557 499 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 RCN1Q15293 331 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 ATP6AP1Q15904 470 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 CHRFAM7AQ494W8 412 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 VHLLQ6RSH7 139 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 SLC46A3Q7Z3Q1 461 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 RBM45Q8IUH3 476 aaKnown RBP9.78□□□□□ -0.84
CLCF1-202ENST00000533438 IL17RDQ8NFM7 739 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 VANGL1Q8TAA9 524 aaPredicted RBP9.78□□□□□ -0.84
CLCF1-202ENST00000533438 ADAMTS16Q8TE57 1224 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 TMEM158Q8WZ71 300 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 ZNF347Q96SE7 839 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 DOK1Q99704 481 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 FOXB1Q99853 325 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 VRK1Q99986 396 aaPredicted RBP9.78□□□□□ -0.84
CLCF1-202ENST00000533438 PIMREGQ9BSJ6 248 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 ZNF426Q9BUY5 554 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 POLR2J2Q9GZM3 115 aaKnown RBP9.78□□□□□ -0.84
CLCF1-202ENST00000533438 POLR2J3Q9H1A7 115 aaKnown RBP9.78□□□□□ -0.84
CLCF1-202ENST00000533438 RNPEPL1Q9HAU8 725 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 NOX3Q9HBY0 568 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 STX18Q9P2W9 335 aaKnown RBP9.78□□□□□ -0.84
CLCF1-202ENST00000533438 FBXO9Q9UK97 447 aaPredicted RBP9.78□□□□□ -0.84
CLCF1-202ENST00000533438 SVEP1Q4LDE5 3571 aa9.78□□□□□ -0.84
CLCF1-202ENST00000533438 LOC390937A0A1W2PQ73 354 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 DEAF1O75398 565 aaPredicted RBP9.77□□□□□ -0.85
CLCF1-202ENST00000533438 PRSS23O95084 383 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 ATP6V1G2O95670 118 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 IFNA2P01563 188 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 HLA-HP01893 362 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 IGFBP1P08833 259 aaPredicted RBP9.77□□□□□ -0.85
CLCF1-202ENST00000533438 ADORA3P0DMS8 318 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 ANPEPP15144 967 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 ZNF14P17017 642 aaPredicted RBP9.77□□□□□ -0.85
CLCF1-202ENST00000533438 ZNF16P17020 682 aaPredicted RBP9.77□□□□□ -0.85
CLCF1-202ENST00000533438 NPR2P20594 1047 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 AHCYP23526 432 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 THBS2P35442 1172 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 ZP4Q12836 540 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 DAG1Q14118 895 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 ZNF74Q16587 644 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 GSG1Q2KHT4 349 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 CYB5R2Q6BCY4 276 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 OR2T5Q6IEZ7 315 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 TTC33Q6PID6 262 aaPredicted RBP9.77□□□□□ -0.85
CLCF1-202ENST00000533438 ZNF813Q6ZN06 617 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 DEF8Q6ZN54 512 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 CYP4Z1Q86W10 505 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 PQLC1Q8N2U9 271 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 C10orf53Q8N6V4 93 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 OR2T29Q8NH02 315 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 LRTOMTQ8WZ04 291 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 DHRS1Q96LJ7 313 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 PRRC1Q96M27 445 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 FOXN4Q96NZ1 517 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 PKP2Q99959 881 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 ULBP2Q9BZM5 246 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 B3GAT2Q9NPZ5 323 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 TAS2R5Q9NYW4 299 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 DNAJB9Q9UBS3 223 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 RIMS3Q9UJD0 308 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 CDC42EP3Q9UKI2 254 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 SLC7A7Q9UM01 511 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 A4GNTQ9UNA3 340 aa9.77□□□□□ -0.85
CLCF1-202ENST00000533438 FAM32AQ9Y421 112 aaKnown RBP9.77□□□□□ -0.85
CLCF1-202ENST00000533438 TRAPPC13A5PLN9 417 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 ZNF726A6NNF4 738 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 RNF212BA8MTL3 300 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 C11orf98E9PRG8 122 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 J3KTA2 159 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 FFAR1O14842 300 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 OR5F1O95221 314 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 CH25HO95992 272 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 CST1P01037 141 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 ASAH2BP0C7U1 165 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 FAM157CP0CG43 387 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 CD79AP11912 226 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 ZNF35P13682 527 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 IFNGR1P15260 489 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 B4GALT1P15291 398 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 NR4A1P22736 598 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 CAPZA2P47755 286 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 GZMKP49863 264 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 BIDP55957 195 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 SNTB2Q13425 540 aaKnown RBP9.76□□□□□ -0.85
CLCF1-202ENST00000533438 GGTLC2Q14390 218 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 GK3PQ14409 553 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 MSMPQ1L6U9 139 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 KRT80Q6KB66 452 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 SLC35D2Q76EJ3 337 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 OFCC1Q8IZS5 231 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 SVOPLQ8N434 492 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms