RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 F8W036 122 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 GPR31O00270 319 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 CDC40O60508 579 aaKnown RBP eCLIP13.41□□□□□ -0.26
CAPN1-224ENST00000533129 SLC25A1P53007 311 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 UBE2IP63279 158 aaKnown RBP13.41□□□□□ -0.26
CAPN1-224ENST00000533129 TOMM20Q15388 145 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 LDLRAD3Q86YD5 345 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 OR51D1Q8NGF3 324 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 ZNF75AQ96N20 296 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 ZNF471Q9BX82 626 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-224ENST00000533129 KIR3DX1Q9H7L2 352 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 BIN3Q9NQY0 253 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 COMMD9Q9P000 198 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 MMP17Q9ULZ9 603 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 SLC17A4Q9Y2C5 497 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 KLHDC2Q9Y2U9 406 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-224ENST00000533129 MEIS3P1A6NDR6 274 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 OR4C45A6NMZ5 311 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 NKX2-2O95096 273 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 RPS4XP62701 263 aaKnown RBP13.41□□□□□ -0.26
CAPN1-224ENST00000533129 CCINQ13939 588 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 EXOSC7Q15024 291 aaKnown RBP13.41□□□□□ -0.26
CAPN1-224ENST00000533129 PRICKLE4Q2TBC4 344 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 LEG1Q6P5S2 330 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 ACOT7LQ6ZUV0 252 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 ZNF550Q7Z398 422 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 TMEM229BQ8NBD8 167 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 OR8S1Q8NH09 359 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 GPR148Q8TDV2 347 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 DVL3Q92997 716 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-224ENST00000533129 TMEM106AQ96A25 262 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 TM4SF19Q96DZ7 209 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 ADAD1Q96M93 576 aaKnown RBP13.41□□□□□ -0.26
CAPN1-224ENST00000533129 COMMD4Q9H0A8 199 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 PCDHB10Q9UN67 800 aa13.41□□□□□ -0.26
CAPN1-224ENST00000533129 RNF222A6NCQ9 220 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 TMEM212A6NML5 194 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 H0YC42 278 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 SULT1C2O00338 296 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 GNB5O14775 395 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 NARSO43776 548 aaKnown RBP13.4□□□□□ -0.26
CAPN1-224ENST00000533129 KCNJ13O60928 360 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 DNAJB6O75190 326 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 PVALBP20472 110 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-224ENST00000533129 POU3F4P49335 361 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 VWA2Q5GFL6 755 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 BIVMQ86UB2 503 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 ZNF511Q8NB15 262 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 ESRP2Q9H6T0 727 aaKnown RBP13.4□□□□□ -0.26
CAPN1-224ENST00000533129 XIRP2A4UGR9 3374 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 FAM171A2A8MVW0 826 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 FGF17O60258 216 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 GUSBP08236 651 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 ZNF16P17020 682 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-224ENST00000533129 ZNF10P21506 573 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-224ENST00000533129 RFC3P40938 356 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 PRPS1P60891 318 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 MGAT2Q10469 447 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 DHRS7BQ6IAN0 325 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-224ENST00000533129 LIN54Q6MZP7 749 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 TMEM92Q6UXU6 159 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 PGAP1Q75T13 922 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 OR1S2Q8NGQ3 325 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 THRSPQ92748 146 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 HOXB13Q92826 284 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-224ENST00000533129 MCHR2Q969V1 340 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 APOOQ9BUR5 198 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 GAREM1Q9H706 876 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 LYRM4Q9HD34 91 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 SLC2A4RGQ9NR83 387 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 TMEM74BQ9NUR3 256 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 EPHA6Q9UF33 1036 aa13.4□□□□□ -0.26
CAPN1-224ENST00000533129 URADA6NGE7 173 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 SHISA7A6NL88 538 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 PRSS44E7EML9 344 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 SLC25A12O75746 678 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 RAB3DO95716 219 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 APOC1P02654 83 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 CEACAM5P06731 702 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 SRFP11831 508 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 BDKRB2P30411 391 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 DLSTP36957 453 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 DCDP81605 110 aaKnown RBP13.39□□□□□ -0.27
CAPN1-224ENST00000533129 ZNF528Q3MIS6 628 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 TMEM88Q6PEY1 159 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 TMEM205Q6UW68 189 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 TMED4Q7Z7H5 227 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 CDC20BQ86Y33 519 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 SPAG16Q8N0X2 631 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 ZNF676Q8N7Q3 588 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 EXD3Q8N9H8 876 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 OR2G2Q8NGZ5 317 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-224ENST00000533129 A0A087WUJ7 227 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 LOC100289279A0A1B0GTE1 492 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 TCRBV21S2A2A0A5A6 115 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 P2RX6O15547 441 aa13.39□□□□□ -0.27
CAPN1-224ENST00000533129 HOXC4P09017 264 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-224ENST00000533129 CDKN2AP42771 156 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms