RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 RUNX1T1Q06455 604 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 GABPB1Q06547 395 aaPredicted RBP16.36■□□□□ 0.21
SSH3-209ENST00000532600 FLOT2Q14254 428 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 MELKQ14680 651 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 GSG1Q2KHT4 349 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 C6orf52Q5T4I8 152 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 ZCCHC24Q8N2G6 241 aaKnown RBP16.36■□□□□ 0.21
SSH3-209ENST00000532600 SVOPLQ8N434 492 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 DHRS1Q96LJ7 313 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 MMADHCQ9H3L0 296 aaPredicted RBP16.36■□□□□ 0.21
SSH3-209ENST00000532600 NMNAT1Q9HAN9 279 aaPredicted RBP16.36■□□□□ 0.21
SSH3-209ENST00000532600 C20orf141Q9NUB4 165 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 POFUT2Q9Y2G5 429 aa16.36■□□□□ 0.21
SSH3-209ENST00000532600 COL6A5A8TX70 2615 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 TCRBV3S1A0A5B6 114 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 AQP12BA6NM10 295 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 FABP3P05413 133 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 CSF3P09919 207 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 IGHV4-31P0DP07 118 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 NPR2P20594 1047 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 PPOXP50336 477 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 ST3GAL3Q11203 375 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 KRT80Q6KB66 452 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 PIWIL3Q7Z3Z3 882 aaKnown RBP16.35■□□□□ 0.21
SSH3-209ENST00000532600 HIPK1Q86Z02 1210 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 ZDHHC21Q8IVQ6 265 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 SKA3Q8IX90 412 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 AQP12AQ8IXF9 295 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 CDK20Q8IZL9 346 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 CANT1Q8WVQ1 401 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 TMEM239Q8WW34 195 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 LRGUKQ96M69 825 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 VRK1Q99986 396 aaPredicted RBP16.35■□□□□ 0.21
SSH3-209ENST00000532600 FUZQ9BT04 418 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 FNDC11Q9BVV2 318 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 TRIM15Q9C019 465 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 MAGIXQ9H6Y5 334 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 B3GAT2Q9NPZ5 323 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 GLTPQ9NZD2 209 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 RTTNQ86VV8 2226 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 MXRA5Q9NR99 2828 aa16.35■□□□□ 0.21
SSH3-209ENST00000532600 TRBV4-1A0A0J9YWV2 114 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 A8MV72 311 aaPredicted RBP16.34■□□□□ 0.21
SSH3-209ENST00000532600 RNF13O43567 381 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 OR6A2O95222 327 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 PGA4P0DJD7 388 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 PGA3P0DJD8 388 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 NR4A1P22736 598 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 RBM34P42696 430 aaKnown RBP16.34■□□□□ 0.21
SSH3-209ENST00000532600 GIPRP48546 466 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 SNTB2Q13425 540 aaKnown RBP16.34■□□□□ 0.21
SSH3-209ENST00000532600 CCNIQ14094 377 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 DAG1Q14118 895 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 TRAM2Q15035 370 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 SEC23BQ15437 767 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 TBPL2Q6SJ96 375 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 SPATA24Q86W54 205 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 MEX3DQ86XN8 651 aaKnown RBP16.34■□□□□ 0.21
SSH3-209ENST00000532600 ZNF584Q8IVC4 421 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 SLCO4A1Q96BD0 722 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 FOXN4Q96NZ1 517 aa16.34■□□□□ 0.21
SSH3-209ENST00000532600 A0A087WUU8 490 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 IGHV4-61A0A0C4DH41 118 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 A0A1W2PRQ8 180 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 DHRS12A0PJE2 317 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 H1F0P07305 194 aaKnown RBP16.33■□□□□ 0.2
SSH3-209ENST00000532600 TSPAN19P0C672 248 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 USF1P22415 310 aaPredicted RBP16.33■□□□□ 0.2
SSH3-209ENST00000532600 NR4A2P43354 598 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 PTDSS1P48651 473 aaKnown RBP16.33■□□□□ 0.2
SSH3-209ENST00000532600 PDLIM4P50479 330 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 RPL18Q07020 188 aaKnown RBP16.33■□□□□ 0.2
SSH3-209ENST00000532600 DGCR6Q14129 220 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 HIST3H3Q16695 136 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 CYP4Z1Q86W10 505 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 SLC7A13Q8TCU3 470 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 SLC25A44Q96H78 314 aaPredicted RBP16.33■□□□□ 0.2
SSH3-209ENST00000532600 MRPL13Q9BYD1 178 aaKnown RBP16.33■□□□□ 0.2
SSH3-209ENST00000532600 TMEM38BQ9NVV0 291 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 VNN3Q9NY84 501 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 FKBP7Q9Y680 259 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 MALRD1Q5VYJ5 2156 aa16.33■□□□□ 0.2
SSH3-209ENST00000532600 BLOC1S5-TXNDC5H3BN57 136 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 OR7A10O76100 309 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 F13BP05160 661 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 UMPSP11172 480 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 ZNF16P17020 682 aaPredicted RBP16.32■□□□□ 0.2
SSH3-209ENST00000532600 FUT1P19526 365 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 RAB1AP62820 205 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 RAB39AQ14964 217 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 PODNL1Q6PEZ8 512 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 NANOGNBQ7Z5D8 188 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 SLC22A24Q8N4F4 322 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 IL17RDQ8NFM7 739 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 OR52J3Q8NH60 311 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 MOSPD2Q8NHP6 518 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 ACOT11Q8WXI4 607 aaPredicted RBP16.32■□□□□ 0.2
SSH3-209ENST00000532600 ZNF566Q969W8 418 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 CHID1Q9BWS9 393 aa16.32■□□□□ 0.2
SSH3-209ENST00000532600 MRPL37Q9BZE1 423 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms