RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 NR2C1P13056 603 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 MAKP20794 623 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 FUT4P22083 530 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 GLRXP35754 106 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 CTXN1P60606 82 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 GNGT1P63211 74 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 LOXL1Q08397 574 aaPredicted RBP14.88□□□□□ -0.03
PHRF1-204ENST00000532550 CARTPTQ16568 116 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 ANKDD1AQ495B1 522 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 NRN1LQ496H8 165 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 OAFQ86UD1 273 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 ACOT11Q8WXI4 607 aaPredicted RBP14.88□□□□□ -0.03
PHRF1-204ENST00000532550 RBP7Q96R05 134 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 SEPHS2Q99611 448 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 DYNLRB1Q9NP97 96 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 MYOZ1Q9NP98 299 aaPredicted RBP14.88□□□□□ -0.03
PHRF1-204ENST00000532550 YAE1D1Q9NRH1 226 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 MAN2C1Q9NTJ4 1040 aa14.88□□□□□ -0.03
PHRF1-204ENST00000532550 ZNF346Q9UL40 294 aaKnown RBP14.88□□□□□ -0.03
PHRF1-204ENST00000532550 A0A087WUU8 490 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 NDUFS8O00217 210 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 PTHP01270 115 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 SLC9A3P48764 834 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 EVX1P49640 407 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 ZNF133P52736 654 aaPredicted RBP14.87□□□□□ -0.03
PHRF1-204ENST00000532550 GYS2P54840 703 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 RPL27P61353 136 aaKnown RBP14.87□□□□□ -0.03
PHRF1-204ENST00000532550 RPS23P62266 143 aaKnown RBP14.87□□□□□ -0.03
PHRF1-204ENST00000532550 PLP2Q04941 152 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 CD47Q08722 323 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 TOP3AQ13472 1001 aaPredicted RBP14.87□□□□□ -0.03
PHRF1-204ENST00000532550 C10orf128Q5T292 105 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 TBPL2Q6SJ96 375 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 MBOAT2Q6ZWT7 520 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 MEX3DQ86XN8 651 aaKnown RBP14.87□□□□□ -0.03
PHRF1-204ENST00000532550 LRRC18Q8N456 261 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 NEU4Q8WWR8 484 aaPredicted RBP14.87□□□□□ -0.03
PHRF1-204ENST00000532550 HDAC2Q92769 488 aaKnown RBP14.87□□□□□ -0.03
PHRF1-204ENST00000532550 PIMREGQ9BSJ6 248 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 C1orf198Q9H425 327 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 NMNAT1Q9HAN9 279 aaPredicted RBP14.87□□□□□ -0.03
PHRF1-204ENST00000532550 SIAEQ9HAT2 523 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 SMURF2Q9HAU4 748 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 ENPP4Q9Y6X5 453 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 ABCA2Q9BZC7 2435 aa14.87□□□□□ -0.03
PHRF1-204ENST00000532550 YLPM1P49750 1951 aaKnown RBP14.87□□□□□ -0.03
PHRF1-204ENST00000532550 TRAV27A0A087WT01 109 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 IQCMA0A1B0GVH7 501 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 LOC390937A0A1W2PQ73 354 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 SLC22A23A1A5C7 686 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 SLC2A10O95528 541 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 ADRA2AP08913 450 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 USF1P22415 310 aaPredicted RBP14.86□□□□□ -0.03
PHRF1-204ENST00000532550 GUCA1AP43080 201 aaPredicted RBP14.86□□□□□ -0.03
PHRF1-204ENST00000532550 SGCAQ16586 387 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 THEM4Q5T1C6 240 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 ZNF584Q8IVC4 421 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 ZCCHC24Q8N2G6 241 aaKnown RBP14.86□□□□□ -0.03
PHRF1-204ENST00000532550 RNF148Q8N7C7 305 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 SLC30A7Q8NEW0 376 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 OR1J2Q8NGS2 313 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 FNDC8Q8TC99 324 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 NSMAFQ92636 917 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 MRPL24Q96A35 216 aaKnown RBP14.86□□□□□ -0.03
PHRF1-204ENST00000532550 FOXN4Q96NZ1 517 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 LRRC37BQ96QE4 947 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 KCNK17Q96T54 332 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 ALG12Q9BV10 488 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 LRMDAQ9H2I8 198 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 ANKRD19PQ9H560 264 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 DCAF13Q9NV06 445 aaKnown RBP14.86□□□□□ -0.03
PHRF1-204ENST00000532550 SLC7A8Q9UHI5 535 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 SAMD4AQ9UPU9 718 aaKnown RBP14.86□□□□□ -0.03
PHRF1-204ENST00000532550 ARL2BPQ9Y2Y0 163 aa14.86□□□□□ -0.03
PHRF1-204ENST00000532550 A0A096LNT2 108 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 A6NIZ1 184 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 CRLF1O75462 422 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 PRSS23O95084 383 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 CDAP32320 146 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 RAP1BP61224 184 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 RAP1AP62834 184 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 MRPS34P82930 218 aaKnown RBP14.85□□□□□ -0.03
PHRF1-204ENST00000532550 TMEM249Q2WGJ8 235 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 FAM205BPQ63HN1 556 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 TMPRSS11FQ6ZWK6 438 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 PIGWQ7Z7B1 504 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 IGFN1Q86VF2 1251 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 ZNF540Q8NDQ6 660 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 RBM15BQ8NDT2 890 aaKnown RBP14.85□□□□□ -0.03
PHRF1-204ENST00000532550 MRPL37Q9BZE1 423 aaKnown RBP14.85□□□□□ -0.03
PHRF1-204ENST00000532550 MS4A5Q9H3V2 200 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 CDH20Q9HBT6 801 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 CCNB1IP1Q9NPC3 277 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 TMEM5Q9Y2B1 443 aa14.85□□□□□ -0.03
PHRF1-204ENST00000532550 CHD3Q12873 2000 aaKnown RBP14.84□□□□□ -0.03
PHRF1-204ENST00000532550 SYNGR3O43761 229 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 IGHMP01871 453 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 H1F0P07305 194 aaKnown RBP14.84□□□□□ -0.03
PHRF1-204ENST00000532550 CCL2P13500 99 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 DAOP14920 347 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms