RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 CALCRP30988 508 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 HOXC12P31275 282 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 NAAAQ02083 359 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 KEAP1Q14145 624 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 MICAQ29983 383 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 NRN1LQ496H8 165 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 THEM4Q5T1C6 240 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 FAM205BPQ63HN1 556 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 SMARCD3Q6STE5 483 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 DPY19L2P2Q6ZN68 376 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 PTCHD4Q6ZW05 846 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 HDDC2Q7Z4H3 204 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 GNPDA2Q8TDQ7 276 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 OR52D1Q9H346 318 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 MMADHCQ9H3L0 296 aaPredicted RBP12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 CISD1Q9NZ45 108 aaKnown RBP12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 ITGB1BP2Q9UKP3 347 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 IER3IP1Q9Y5U9 82 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 U3KQV3 271 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 ITPR3Q14573 2671 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 CELSR1Q9NYQ6 3014 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 MAP1AP78559 2803 aaPredicted RBP12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 VPS13CQ709C8 3753 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 A6NIZ1 184 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 ATP6V1G2-DDX39BF2Z307 99 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 H7C1C5 153 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 OVOL3O00110 214 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 ARPC3O15145 178 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 ARHGEF9O43307 516 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 SCG5P05408 212 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 MMP7P09237 267 aaPredicted RBP12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 OR8G3PP0DMU2 310 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 PAX1P15863 534 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 ZNF14P17017 642 aaPredicted RBP12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 SDHAP31040 664 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 CDAP32320 146 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 ARR3P36575 388 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 RPL4P36578 427 aaKnown RBP12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 CDKN2AP42771 156 aaKnown RBP12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 RASSF2P50749 326 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 ART1P52961 327 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 RAP1BP61224 184 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 LCN6P62502 163 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 RAP1AP62834 184 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 MRPS34P82930 218 aaKnown RBP12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 HGFACQ04756 655 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 PIGFQ07326 219 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 ETFDHQ16134 617 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 GPR139Q6DWJ6 353 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 SPNS3Q6ZMD2 512 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 ZNF620Q6ZNG0 422 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 DTX2Q86UW9 622 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 SPATA24Q86W54 205 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 ZNF584Q8IVC4 421 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 PIAS4Q8N2W9 510 aaPredicted RBP12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 LINC00471Q8N535 108 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 SMAP2Q8WU79 429 aaPredicted RBP12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 PIGTQ969N2 578 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 FBXW5Q969U6 566 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 RASD2Q96D21 266 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 DDOQ99489 341 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 SH3GL3Q99963 347 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 NTN4Q9HB63 628 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 ZNF701Q9NV72 531 aaPredicted RBP12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 BEX4Q9NWD9 120 aaPredicted RBP12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 IL20Q9NYY1 176 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 EDARQ9UNE0 448 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 MOKQ9UQ07 419 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 SAMHD1Q9Y3Z3 626 aaKnown RBP12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 HIVEP1P15822 2718 aa12.1□□□□□ -0.47
TSPAN4-220ENST00000532375 TEX13CA0A0J9YWL9 993 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 PRSS37A4D1T9 235 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 AHCYL1O43865 530 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 FKBP6O75344 327 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 CCNB2O95067 398 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 IGFBP1P08833 259 aaPredicted RBP12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 IFNGR2P38484 337 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 GIPRP48546 466 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 ERFP50548 548 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 IDH3GP51553 393 aaPredicted RBP12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 RAB1AP62820 205 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 CD47Q08722 323 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 ZNF362Q5T0B9 420 aaPredicted RBP12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 FAM27BQ5VT28 67 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 SLC22A25Q6T423 547 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 OR8D4Q8NGM9 314 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 FNDC8Q8TC99 324 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 SAMD8Q96LT4 415 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 ZNF570Q96NI8 536 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 RBP7Q96R05 134 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 DHRS9Q9BPW9 319 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 TRAF4Q9BUZ4 470 aaPredicted RBP12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 DGCR6LQ9BY27 220 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 PLA2G12AQ9BZM1 189 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 GRIP2Q9C0E4 1043 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 DENND2DQ9H6A0 471 aaPredicted RBP12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 REEP1Q9H902 201 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 SIAEQ9HAT2 523 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 MOV10Q9HCE1 1003 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms