RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 HDAC2Q92769 488 aaKnown RBP19.91■□□□□ 0.78
CAPN1-222ENST00000532285 MCUR1Q96AQ8 359 aa19.91■□□□□ 0.78
CAPN1-222ENST00000532285 MS4A3Q96HJ5 214 aa19.91■□□□□ 0.78
CAPN1-222ENST00000532285 DHRS1Q96LJ7 313 aa19.91■□□□□ 0.78
CAPN1-222ENST00000532285 KCNK17Q96T54 332 aa19.91■□□□□ 0.78
CAPN1-222ENST00000532285 ALG12Q9BV10 488 aa19.91■□□□□ 0.78
CAPN1-222ENST00000532285 ZNF346Q9UL40 294 aaKnown RBP19.91■□□□□ 0.78
CAPN1-222ENST00000532285 A6NIZ1 184 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 DIRAS1O95057 198 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 OR4A8P0C604 315 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 RAP1BP61224 184 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 RAP1AP62834 184 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 CD47Q08722 323 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 ADIPOQQ15848 244 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 IQCCQ4KMZ1 466 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 VHLLQ6RSH7 139 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 IGFN1Q86VF2 1251 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 ARHGAP24Q8N264 748 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 NMD3Q96D46 503 aaKnown RBP19.9■□□□□ 0.78
CAPN1-222ENST00000532285 RBP7Q96R05 134 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 SMR3AQ99954 134 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 SH3GL3Q99963 347 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 NDEL1Q9GZM8 345 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 ZNF442Q9H7R0 627 aa19.9■□□□□ 0.78
CAPN1-222ENST00000532285 KRCC1Q9NPI7 259 aaPredicted RBP19.9■□□□□ 0.78
CAPN1-222ENST00000532285 B9A039 149 aa19.89■□□□□ 0.77
CAPN1-222ENST00000532285 SMAD7O15105 426 aaKnown RBP19.89■□□□□ 0.77
CAPN1-222ENST00000532285 SSX4O60224 188 aa19.89■□□□□ 0.77
CAPN1-222ENST00000532285 PATE4P0C8F1 98 aa19.89■□□□□ 0.77
CAPN1-222ENST00000532285 CALB2P22676 271 aa19.89■□□□□ 0.77
CAPN1-222ENST00000532285 NUDT6P53370 316 aa19.89■□□□□ 0.77
CAPN1-222ENST00000532285 SNRPD2P62316 118 aaKnown RBP19.89■□□□□ 0.77
CAPN1-222ENST00000532285 DAG1Q14118 895 aa19.89■□□□□ 0.77
CAPN1-222ENST00000532285 SLC36A2Q495M3 483 aa19.89■□□□□ 0.77
CAPN1-222ENST00000532285 THEM4Q5T1C6 240 aa19.89■□□□□ 0.77
CAPN1-222ENST00000532285 TMEM53Q6P2H8 277 aa19.89■□□□□ 0.77
CAPN1-222ENST00000532285 DNM1P46Q6ZS02 220 aa19.89■□□□□ 0.77
CAPN1-222ENST00000532285 FGFBP3Q8TAT2 258 aa19.89■□□□□ 0.77
CAPN1-222ENST00000532285 ZNF519Q8TB69 540 aa19.89■□□□□ 0.77
CAPN1-222ENST00000532285 FAM46AQ96IP4 442 aaKnown RBP19.89■□□□□ 0.77
CAPN1-222ENST00000532285 TSPAN32Q96QS1 320 aa19.89■□□□□ 0.77
CAPN1-222ENST00000532285 SPEF1Q9Y4P9 236 aa19.89■□□□□ 0.77
CAPN1-222ENST00000532285 NIPBLQ6KC79 2804 aaeCLIP19.89■□□□□ 0.77
CAPN1-222ENST00000532285 ZANQ9Y493 2812 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 TRBV4-1A0A0J9YWV2 114 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 SLC2A10O95528 541 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 SERPINA5P05154 406 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 FABP3P05413 133 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 ZNF35P13682 527 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 NR4A1P22736 598 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 THBS4P35443 961 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 RPL4P36578 427 aaKnown RBP19.88■□□□□ 0.77
CAPN1-222ENST00000532285 MRPS34P82930 218 aaKnown RBP19.88■□□□□ 0.77
CAPN1-222ENST00000532285 RAB39AQ14964 217 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 EFNB3Q15768 340 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 CLEC9AQ6UXN8 241 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 SLC16A14Q7RTX9 510 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 OR52J3Q8NH60 311 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 RNF121Q9H920 327 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 SIAEQ9HAT2 523 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 IL1RAPQ9NPH3 570 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 ACTR3BQ9P1U1 418 aa19.88■□□□□ 0.77
CAPN1-222ENST00000532285 FBXO9Q9UK97 447 aaPredicted RBP19.88■□□□□ 0.77
CAPN1-222ENST00000532285 C2CD3Q4AC94 2353 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 GADD45GO95257 159 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 CD14P08571 375 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 NPR2P20594 1047 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 OMPP47874 163 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 LIMS1P48059 325 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 ERVK-25P63136 954 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 SPIBQ01892 262 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 FMODQ06828 376 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 SEC23BQ15437 767 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 KRT80Q6KB66 452 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 SLC25A47Q6Q0C1 308 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 ARIH2OSQ8N7S6 290 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 HTRA1Q92743 480 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 FUZQ9BT04 418 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 KCNN2Q9H2S1 579 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 PLK3Q9H4B4 646 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 GRHPRQ9UBQ7 328 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 AURKCQ9UQB9 309 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 UGT2A1Q9Y4X1 527 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 NF1P21359 2839 aa19.87■□□□□ 0.77
CAPN1-222ENST00000532285 SH3PXD2BA1X283 911 aa19.86■□□□□ 0.77
CAPN1-222ENST00000532285 PTP4A3O75365 173 aa19.86■□□□□ 0.77
CAPN1-222ENST00000532285 PTHP01270 115 aa19.86■□□□□ 0.77
CAPN1-222ENST00000532285 T-ENOLP0DO92 83 aa19.86■□□□□ 0.77
CAPN1-222ENST00000532285 EFNA4P52798 201 aa19.86■□□□□ 0.77
CAPN1-222ENST00000532285 DSCR9P59020 149 aa19.86■□□□□ 0.77
CAPN1-222ENST00000532285 GALK2Q01415 458 aa19.86■□□□□ 0.77
CAPN1-222ENST00000532285 SNTB2Q13425 540 aaKnown RBP19.86■□□□□ 0.77
CAPN1-222ENST00000532285 MTX3Q5HYI7 312 aa19.86■□□□□ 0.77
CAPN1-222ENST00000532285 RINLQ6ZS11 566 aa19.86■□□□□ 0.77
CAPN1-222ENST00000532285 ZNF584Q8IVC4 421 aa19.86■□□□□ 0.77
CAPN1-222ENST00000532285 LRRC18Q8N456 261 aa19.86■□□□□ 0.77
CAPN1-222ENST00000532285 NSMAFQ92636 917 aa19.86■□□□□ 0.77
CAPN1-222ENST00000532285 RHNO1Q9BSD3 238 aa19.86■□□□□ 0.77
CAPN1-222ENST00000532285 MUC13Q9H3R2 512 aa19.86■□□□□ 0.77
CAPN1-222ENST00000532285 C1orf198Q9H425 327 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms