RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 TMEM27Q9HBJ8 222 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 C20orf141Q9NUB4 165 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 ELOVL5Q9NYP7 299 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 HSPB7Q9UBY9 170 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 TESQ9UGI8 421 aaKnown RBP5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 GPR160Q9UJ42 338 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 NDRG4Q9ULP0 352 aaKnown RBP5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 A4GNTQ9UNA3 340 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 TRAPPC4Q9Y296 219 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 AP3M1Q9Y2T2 418 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 ARL2BPQ9Y2Y0 163 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 NCOA6Q14686 2063 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 GTF3C1Q12789 2109 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 DIDO1Q9BTC0 2240 aaKnown RBP5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 ICE1Q9Y2F5 2266 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 COL12A1Q99715 3063 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 NUP214P35658 2090 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 DNAJC13O75165 2243 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 A0A1B0GWA3 101 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 ELOVL7A1L3X0 281 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 CCT8L1PA6NM43 557 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 ZNF724A8MTY0 619 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 FAM220BPB1ANY3 271 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 USP17L23D6RBM5 183 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 C16orf97H3BN30 126 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 NDUFAB1O14561 156 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 GPR171O14626 319 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 WIPF1O43516 503 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 EIF1BO60739 113 aaKnown RBP5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 GCM2O75603 506 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 DCTN3O75935 186 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 LGI1O95970 557 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 FAM107AO95990 144 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 GPIP06744 558 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 C8BP07358 591 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 PNMTP11086 282 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 KLK2P20151 261 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 LORP23490 312 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 HTR2AP28223 471 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 UGT2B10P36537 528 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 CD79BP40259 229 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 CAMLGP49069 296 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 PCYT1AP49585 367 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 SLC7A2P52569 658 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 ZNF134P52741 427 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 TIRAPP58753 221 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 LIPEQ05469 1076 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 FAM27E3Q08E93 113 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 CEACAM7Q14002 265 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 GAMTQ14353 236 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 PDK3Q15120 406 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 OR7A5Q15622 319 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 DUSP7Q16829 419 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 ALG10BQ5I7T1 473 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 C1orf140Q5VVS0 124 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 FAM91A1Q658Y4 838 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 ULK3Q6PHR2 472 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 C6orf89Q6UWU4 347 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 TMEM108Q6UXF1 575 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 HACD2Q6Y1H2 254 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 KCTD9Q7L273 389 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 NUFIP2Q7Z417 695 aaKnown RBP5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 ZDHHC13Q8IUH4 622 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 GPR32P1Q8NGA4 272 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 VANGL1Q8TAA9 524 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 LINC01560Q8TB33 94 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 PIGXQ8TBF5 258 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 DNAJA4Q8WW22 397 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 PROX1Q92786 737 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 TAMM41Q96BW9 452 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 SLC47A1Q96FL8 570 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 ZNF300Q96RE9 604 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 CCT8L2Q96SF2 557 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 MCHR1Q99705 422 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 ARHGDIGQ99819 225 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 PSD2Q9BQI7 771 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 PIMREGQ9BSJ6 248 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 TAPBPLQ9BX59 468 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 PLK3Q9H4B4 646 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 YY1AP1Q9H869 796 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 C12orf10Q9HB07 376 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 MCCC2Q9HCC0 563 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 CMTM6Q9NX76 183 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 EMC3Q9P0I2 261 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 NDRG3Q9UGV2 375 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 ING1Q9UK53 422 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 SLC9A8Q9Y2E8 581 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 SH3GLB1Q9Y371 365 aa5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 SPTBN1Q01082 2364 aaKnown RBP5.11□□□□□ -1.59
HMGB1P42-201ENST00000532126 IGKV3D-15A0A087WSY6 115 aa5.1□□□□□ -1.59
HMGB1P42-201ENST00000532126 A0A0B4J2E0 115 aa5.1□□□□□ -1.59
HMGB1P42-201ENST00000532126 A0A1B0GX12 115 aa5.1□□□□□ -1.59
HMGB1P42-201ENST00000532126 SH3D21A4FU49 640 aa5.1□□□□□ -1.59
HMGB1P42-201ENST00000532126 CPSF4LA6NMK7 179 aaKnown RBP5.1□□□□□ -1.59
HMGB1P42-201ENST00000532126 ZNF716A6NP11 495 aa5.1□□□□□ -1.59
HMGB1P42-201ENST00000532126 ZNF814B7Z6K7 855 aa5.1□□□□□ -1.59
HMGB1P42-201ENST00000532126 NME4O00746 187 aa5.1□□□□□ -1.59
HMGB1P42-201ENST00000532126 CASKO14936 926 aa5.1□□□□□ -1.59
HMGB1P42-201ENST00000532126 OR2T1O43869 369 aa5.1□□□□□ -1.59
HMGB1P42-201ENST00000532126 PSPNO60542 156 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms