RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	SDSL	Q96GA7	329 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	NOL4L	Q96MY1	436 aa	Predicted RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	CDCA3	Q99618	268 aa	Predicted RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	URM1	Q9BTM9	101 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	ZNF717	Q9BY31	904 aa	Predicted RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	MRPS26	Q9BYN8	205 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	TMBIM4	Q9HC24	238 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	AGPAT4	Q9NRZ5	378 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	VNN3	Q9NY84	501 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	RCL1	Q9Y2P8	373 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	ACOT9	Q9Y305	439 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	WIPI2	Q9Y4P8	454 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	MAP2	P11137	1827 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	FAM208A	Q9UK61	1670 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	XRN1	Q8IZH2	1706 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	ZNF729	A6NN14	1252 aa	Predicted RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	C15orf62	A8K5M9	175 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	SLC31A1	O15431	190 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	NUPL2	O15504	423 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	RCVRN	P35243	200 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	ARR3	P36575	388 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	OPRD1	P41143	372 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	DNA2	P51530	1060 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	LBX1	P52954	281 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	CTSW	P56202	376 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	CLDN6	P56747	220 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	MLLT11	Q13015	90 aa	Predicted RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	SRSF6	Q13247	344 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	SMCO1	Q147U7	214 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	UBE2V2	Q15819	145 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	SPIN3	Q5JUX0	258 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	MARC1	Q5VT66	337 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	TCEAL6	Q6IPX3	200 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	HSD11B1L	Q7Z5J1	315 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	TSEN54	Q7Z6J9	526 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	PUSL1	Q8N0Z8	303 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	STK40	Q8N2I9	435 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	MREG	Q8N565	214 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	OR4F17	Q8NGA8	305 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	OR4F5	Q8NH21	305 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	PYROXD1	Q8WU10	500 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	FLYWCH2	Q96CP2	140 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	ZIM3	Q96PE6	472 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	NEDD4L	Q96PU5	975 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	OR4F4	Q96R69	305 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	EPYC	Q99645	322 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	TRIM51	Q9BSJ1	452 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	FBXO8	Q9NRD0	319 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	SLC2A9	Q9NRM0	540 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	LSM7	Q9UK45	103 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	SCML2	Q9UQR0	700 aa		4.57	□□□□□ -1.68
ECHDC1-222	ENST00000531967	KDM6A	O15550	1401 aa	Predicted RBP	4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	MED1	Q15648	1581 aa	Predicted RBP	4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	NCR1	O76036	304 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	MPZL1	O95297	269 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	NDUFA10	O95299	355 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	CTDNEP1	O95476	244 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	THRA	P10827	490 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	GP1BB	P13224	206 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	ZNF35	P13682	527 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	SLC35B1	P78383	322 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	TNFRSF9	Q07011	255 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	ZNF268	Q14587	947 aa	Predicted RBP	4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	TAL2	Q16559	108 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	C3AR1	Q16581	482 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	NDUFA9	Q16795	377 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	DDI2	Q5TDH0	399 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	C1orf189	Q5VU69	101 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	NIPAL1	Q6NVV3	410 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	PEG10	Q86TG7	708 aa	Known RBP	4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	VN1R2	Q8NFZ6	395 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	IL17D	Q8TAD2	202 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	TFAP2B	Q92481	460 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	TAMM41	Q96BW9	452 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	ADO	Q96SZ5	270 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	TIGAR	Q9NQ88	270 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	CLN6	Q9NWW5	311 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	RTL9	Q8NET4	1388 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	EDC4	Q6P2E9	1401 aa	Known RBP	4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	MON2	Q7Z3U7	1717 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967		A0A0A6YYD5	115 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	GLYATL1P3	A0A0U1RQE8	302 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	LRIT2	A6NDA9	550 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	LILRA5	A6NI73	299 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	PP2D1	A8MPX8	630 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967		A8MVM7	634 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	FTCDNL1	E5RQL4	147 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	KIAA0513	O60268	411 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	UGT2B17	O75795	530 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	ANGPTL1	O95841	491 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	GUSB	P08236	651 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	RNF224	P0DH78	156 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	HOXA1	P49639	335 aa	Predicted RBP	4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	IDH3G	P51553	393 aa	Predicted RBP	4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	CAV2	P51636	162 aa		4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	ZNF658B	Q4V348	819 aa	Predicted RBP	4.56	□□□□□ -1.68
ECHDC1-222	ENST00000531967	C5orf46	Q6UWT4	87 aa		4.56	□□□□□ -1.68

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