RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CEP78Q5JTW2 689 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 FAM27D1Q5T7N8 215 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 PYHIN1Q6K0P9 492 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 H3F3CQ6NXT2 135 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 NR2C2APQ86WQ0 139 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 UEVLDQ8IX04 471 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 CADM3Q8N126 398 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 ESX1Q8N693 406 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 NLGN4YQ8NFZ3 816 aaPredicted RBP13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 RNF166Q96A37 237 aaPredicted RBP13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 OXGR1Q96P68 337 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 DERL3Q96Q80 235 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 OR14A2Q96R54 314 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 GPR87Q9BY21 358 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 SPRY4Q9C004 299 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 B3GNT4Q9C0J1 378 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 ZNF160Q9HCG1 818 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 NOX4Q9NPH5 578 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 FRRS1LQ9P0K9 344 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 KLHL13Q9P2N7 655 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 EXTL2Q9UBQ6 330 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 KLHDC2Q9Y2U9 406 aa13.25□□□□□ -0.29
ECHDC1-220ENST00000528402 CCDC187A0A096LP49 1063 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 OR4C45A6NMZ5 311 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 PRR32B1ATL7 298 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 H3BML4 177 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 GPR171O14626 319 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 DVL2O14641 736 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 TLX3O43711 291 aaPredicted RBP13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 EIF1BO60739 113 aaKnown RBP13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 TPPPO94811 219 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 RPP14O95059 124 aaKnown RBP13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 PMS2P2O95744 297 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 PRKAR1AP10644 381 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 ELK1P19419 428 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 AZGP1P25311 298 aaKnown RBP13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 RANBP1P43487 201 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 PITPNBP48739 271 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 INPP1P49441 399 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 RIDAP52758 137 aaKnown RBP13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 SCAND1P57086 179 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 OR2B6P58173 313 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 POU3F1Q03052 451 aaPredicted RBP13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 NHLRC1Q6VVB1 395 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 PPP1R32Q7Z5V6 425 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 KRT77Q7Z794 578 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 OR1J4Q8NGS1 313 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 TRMT10AQ8TBZ6 339 aaKnown RBP13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 TXNDC15Q96J42 360 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 ELOVL3Q9HB03 270 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 TCF7L1Q9HCS4 588 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 MRPL22Q9NWU5 206 aaKnown RBP13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 SLCO1C1Q9NYB5 712 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 KCNG2Q9UJ96 466 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 FBXL2Q9UKC9 423 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 COA3Q9Y2R0 106 aaPredicted RBP13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 V9GY05 133 aa13.24□□□□□ -0.29
ECHDC1-220ENST00000528402 GJE1A6NN92 205 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 C21orf140B9A014 251 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 CDX4O14627 284 aaPredicted RBP13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 VAMP5O95183 116 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 SERPINA7P05543 415 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 SPARCP09486 303 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 HLA-DOBP13765 273 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 LIFP15018 202 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 MELKQ14680 651 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 SF3A2Q15428 464 aaKnown RBP13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 MEP1BQ16820 701 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 TIGD3Q6B0B8 471 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 TMEM225Q6GV28 225 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 JMJD6Q6NYC1 403 aaPredicted RBP13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 LRRN1Q6UXK5 716 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 TMPPEQ6ZT21 453 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 RAB43Q86YS6 212 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 ZNF676Q8N7Q3 588 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 SAMD12Q8N8I0 201 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 OR13C5Q8NGS8 318 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 OR6X1Q8NH79 312 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 CT55Q8WUE5 264 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 C15orf40Q8WUR7 153 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 MIB2Q96AX9 1013 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 ZC3HAV1LQ96H79 300 aaKnown RBP13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 C4orf45Q96LM5 186 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 OR5B2Q96R09 309 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 NPAS1Q99742 590 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 NAA11Q9BSU3 229 aaPredicted RBP13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 KIF26BQ2KJY2 2108 aa13.23□□□□□ -0.29
ECHDC1-220ENST00000528402 TRBV5-7A0A0A0MS05 114 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 TEX51A0A1B0GUA7 166 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 AIPO00170 330 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 SULT2B1O00204 365 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 CDK2AP1O14519 115 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 DNPH1O43598 174 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 MT-CO3P00414 261 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 IGHG1P01857 330 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 CALCBP10092 127 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 IL11P20809 199 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 DPP4P27487 766 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 DCTDP32321 178 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 CD97P48960 835 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms