RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	ARPC2	O15144	300 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	ENTPD5	O75356	428 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	LY6H	O94772	140 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	DIRAS1	O95057	198 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	SEMG1	P04279	462 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	SERPINA5	P05154	406 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	H1F0	P07305	194 aa	Known RBP	10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	BMP4	P12644	408 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	ZNF35	P13682	527 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	RHCE	P18577	417 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	NR4A1	P22736	598 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	CDA	P32320	146 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	MSX2	P35548	267 aa	Predicted RBP	10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	EFNA4	P52798	201 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	CTXN1	P60606	82 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	RPL27	P61353	136 aa	Known RBP	10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	SNTB2	Q13425	540 aa	Known RBP	10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	DAG1	Q14118	895 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	TAF11	Q15544	211 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	MSMP	Q1L6U9	139 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	NRN1L	Q496H8	165 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	KRT80	Q6KB66	452 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	PODNL1	Q6PEZ8	512 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	TMPRSS11F	Q6ZWK6	438 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	DEFB107A	Q8IZN7	70 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	ZNF525	Q8N782	197 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	CLDN22	Q8N7P3	220 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	DHRS1	Q96LJ7	313 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	SORCS2	Q96PQ0	1159 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	TSPAN32	Q96QS1	320 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	TNFRSF13C	Q96RJ3	184 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	FUZ	Q9BT04	418 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	ALG12	Q9BV10	488 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	SMURF2	Q9HAU4	748 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	STX18	Q9P2W9	335 aa	Known RBP	10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	ZNF346	Q9UL40	294 aa	Known RBP	10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	FAM32A	Q9Y421	112 aa	Known RBP	10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	UGT2A1	Q9Y4X1	527 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	TLN2	Q9Y4G6	2542 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	TRBV4-1	A0A0J9YWV2	114 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	TMEM129	A0AVI4	362 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	GPRIN2	O60269	458 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	GMNN	O75496	209 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	FARS2	O95363	451 aa	Known RBP	10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	NPR2	P20594	1047 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	LIMS1	P48059	325 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	SLC9A3	P48764	834 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	ZNF84	P51523	738 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	MRPS34	P82930	218 aa	Known RBP	10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	CD47	Q08722	323 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	KRT72	Q14CN4	511 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	SEC23B	Q15437	767 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	ANKDD1A	Q495B1	522 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	FGD3	Q5JSP0	725 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	FAM205BP	Q63HN1	556 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	CLEC2A	Q6UVW9	174 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	C16orf89	Q6UX73	402 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	SLC16A14	Q7RTX9	510 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	DPPA2	Q7Z7J5	298 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	CDK20	Q8IZL9	346 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	SVOPL	Q8N434	492 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	FITM2	Q8N6M3	262 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	NSMAF	Q92636	917 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	NABP1	Q96AH0	204 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	PYURF	Q96I23	114 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	FAM46A	Q96IP4	442 aa	Known RBP	10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	NSMCE2	Q96MF7	247 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	RHNO1	Q9BSD3	238 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	FBXL3	Q9UKT7	428 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362	TMEM5	Q9Y2B1	443 aa		10.15	□□□□□ -0.78
PSMC3-205	ENST00000528362		A6NIZ1	184 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	FAM107A	O95990	144 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	F12	P00748	615 aa	Predicted RBP	10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	IGFBP1	P08833	259 aa	Predicted RBP	10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	MMP7	P09237	267 aa	Predicted RBP	10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	OMP	P47874	163 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	PPOX	P50336	477 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	DSCR9	P59020	149 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	RAP1B	P61224	184 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	RAP1A	P62834	184 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	ERVK-25	P63136	954 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	SLC36A2	Q495M3	483 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	ZBED5	Q49AG3	693 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	SLC25A47	Q6Q0C1	308 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	RRM2B	Q7LG56	351 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	FAM122B	Q7Z309	247 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	PAQR4	Q8N4S7	273 aa	Predicted RBP	10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	ARIH2OS	Q8N7S6	290 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	SLC30A7	Q8NEW0	376 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	OR52J3	Q8NH60	311 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	DOK1	Q99704	481 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	GPA33	Q99795	319 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	RNF121	Q9H920	327 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	SIAE	Q9HAT2	523 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	NDE1	Q9NXR1	346 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	ADAM18	Q9Y3Q7	739 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	ABCA2	Q9BZC7	2435 aa		10.14	□□□□□ -0.79
PSMC3-205	ENST00000528362	HIVEP2	P31629	2446 aa		10.13	□□□□□ -0.79
PSMC3-205	ENST00000528362	ANK3	Q12955	4377 aa	Known RBP	10.13	□□□□□ -0.79
PSMC3-205	ENST00000528362		H7C1C5	153 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms