RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 M0R3G1 203 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 IMPA2O14732 288 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 KRT33AO76009 404 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 IGHG1P01857 330 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 ALPLP05186 524 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 ACADSP16219 412 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 EPHA2P29317 976 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 SDHAP31040 664 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 RPS6KA3P51812 740 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 CLRN1P58418 232 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 FMODQ06828 376 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 CD47Q08722 323 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 DBPQ10586 325 aaPredicted RBP10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 FAPQ12884 760 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 PGGHGQ32M88 737 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 SLC35F1Q5T1Q4 408 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 TMEM236Q5W0B7 351 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 FBXW9Q5XUX1 488 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 FAM205BPQ63HN1 556 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 GPR139Q6DWJ6 353 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 PTCHD4Q6ZW05 846 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 HDDC2Q7Z4H3 204 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 CXorf67Q86X51 503 aaPredicted RBP10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 C20orf196Q8IYI0 205 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 PARP8Q8N3A8 854 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 ARIH2OSQ8N7S6 290 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 OR6N1Q8NGY5 312 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 RNASE6Q93091 150 aaKnown RBP10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 ZNF566Q969W8 418 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 SLC29A1Q99808 456 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 RIBC2Q9H4K1 309 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 USE1Q9NZ43 259 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 GRHPRQ9UBQ7 328 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 UPB1Q9UBR1 384 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 MALT1Q9UDY8 824 aa10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 FOXD3Q9UJU5 478 aaPredicted RBP10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 CHD3Q12873 2000 aaKnown RBP10.15□□□□□ -0.78
CCDC90B-210ENST00000528149 ARID1AO14497 2285 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 A6NIZ1 184 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 ZNF587BE7ETH6 402 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 H7C1Q1 480 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 M0R129 80 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 XKRYO14609 159 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 ARHGEF9O43307 516 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 MGRN1O60291 552 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 LYZL6O75951 148 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 SEC14L2O76054 403 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 ATP6V1G2O95670 118 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 ITGA5P08648 1049 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 HIST1H1CP16403 213 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 IGHV1-2P23083 117 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 NOS3P29474 1203 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 ALDH3A2P51648 485 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 CRISP1P54107 249 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 RAP1BP61224 184 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 RAP1AP62834 184 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 ROR2Q01974 943 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 KEAP1Q14145 624 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 FBXL19-AS1Q494R0 122 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 ZBTB49Q6ZSB9 765 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 Q6ZT83 130 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 BEND4Q6ZU67 534 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 GABRG1Q8N1C3 465 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 GALNT4Q8N4A0 578 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 POMGNT2Q8NAT1 580 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 SDR9C7Q8NEX9 313 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 OR2T33Q8NG76 320 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 OR4K13Q8NH42 304 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 TMEM54Q969K7 222 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 ZNF837Q96EG3 531 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 SLC25A44Q96H78 314 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 ZC3HAV1LQ96H79 300 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 KCNK17Q96T54 332 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 ULBP2Q9BZM5 246 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 LINC00470Q9BZP3 86 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 FN3KQ9H479 309 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 GPR35Q9HC97 309 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 ASB6Q9NWX5 421 aa10.14□□□□□ -0.79
CCDC90B-210ENST00000528149 HEATR1Q9H583 2144 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 IGKV1D-43A0A0B4J1Z2 117 aa10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 CASQ2O14958 399 aaPredicted RBP10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 ARPC3O15145 178 aa10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 RAD51DO75771 328 aa10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 SLC2A10O95528 541 aa10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 TXNDC12O95881 172 aa10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 THBDP07204 575 aa10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 APEHP13798 732 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 CDH2P19022 906 aaPredicted RBP10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 COX5AP20674 150 aa10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 POLR2IP36954 125 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 CD79BP40259 229 aa10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 SLC34A1Q06495 639 aa10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 GINS1Q14691 196 aa10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 CEACAM16Q2WEN9 425 aa10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 ZIK1Q3SY52 487 aaPredicted RBP10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 OGFRL1Q5TC84 451 aaPredicted RBP10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 ACSM5Q6NUN0 579 aa10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 SLC27A4Q6P1M0 643 aa10.13□□□□□ -0.79
CCDC90B-210ENST00000528149 LEG1Q6P5S2 330 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms