RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 C10orf111Q8N326 155 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 LINC00471Q8N535 108 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 BMPERQ8N8U9 685 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 NAXEQ8NCW5 288 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 REPS2Q8NFH8 660 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 OR2M7Q8NG81 312 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 OR4S1Q8NGB4 309 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 OR4K5Q8NGD3 323 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 OR5D16Q8NGK9 328 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 OR5M8Q8NGP6 311 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 OR6N1Q8NGY5 312 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 ZNF671Q8TAW3 534 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 ASB17Q8WXJ9 295 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 NTNG2Q96CW9 530 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 MUCL1Q96DR8 90 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 TMEM19Q96HH6 336 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 RCC1LQ96I51 464 aaKnown RBP5.3□□□□□ -1.56
CD44-225ENST00000527326 AKR1E2Q96JD6 320 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 SAMD8Q96LT4 415 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 CCDC74BQ96LY2 380 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 CLUHP3Q96NS8 147 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 RNF2Q99496 336 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 COPS8Q99627 209 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 PRRT1Q99946 306 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 NUDT16L1Q9BRJ7 211 aaKnown RBP5.3□□□□□ -1.56
CD44-225ENST00000527326 ALKBH7Q9BT30 221 aaPredicted RBP5.3□□□□□ -1.56
CD44-225ENST00000527326 FAAP24Q9BTP7 215 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 SELENOIQ9C0D9 397 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 ELOVL4Q9GZR5 314 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 HRH4Q9H3N8 390 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 SRMSQ9H3Y6 488 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 C1orf198Q9H425 327 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 CBLN4Q9NTU7 201 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 MBNL3Q9NUK0 354 aaKnown RBP5.3□□□□□ -1.56
CD44-225ENST00000527326 ACER3Q9NUN7 267 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 TMEM184CQ9NVA4 438 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 GPATCH2Q9NW75 528 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 CHRNA9Q9UGM1 479 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 ZNF346Q9UL40 294 aaKnown RBP5.3□□□□□ -1.56
CD44-225ENST00000527326 SLC7A11Q9UPY5 501 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 CCL27Q9Y4X3 112 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 ENPP4Q9Y6X5 453 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 MIA3Q5JRA6 1907 aa5.3□□□□□ -1.56
CD44-225ENST00000527326 SSC5DA1L4H1 1573 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 A0A0A6YYH2 397 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 TRAV1-2A0A0B4J238 106 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 TRAV39A0A0B4J263 110 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 A0A1W2PPE2 198 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 GXYLT2A0PJZ3 443 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 C2orf78A6NCI8 922 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 TMEM235A6NFC5 223 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 A6NJ64 397 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 ZNF705GA8MUZ8 300 aaPredicted RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 H3BN98 237 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 PYCARD-AS1I3L0S3 204 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 J3KRW8 73 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 CCSO14618 274 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 TNFRSF10CO14798 259 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 XRCC3O43542 346 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 PLPP2O43688 288 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 OR1F1O43749 312 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 NTSR2O95665 410 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 GASTP01350 101 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 RNASE1P07998 156 aaKnown RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 CSF1P09603 554 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 C1SP09871 688 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 HSD3B1P14060 373 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 CELP19835 753 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 CHATP28329 748 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 PRDX3P30048 256 aaKnown RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 TLX1P31314 330 aaPredicted RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 CEACAM8P31997 349 aaPredicted RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 CD80P33681 288 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 NAA10P41227 235 aaPredicted RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 AKR1C3P42330 323 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 MTNR1AP48039 350 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 HTR6P50406 440 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 TNFSF10P50591 281 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 RAB7AP51149 207 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 NOVA1P51513 510 aaKnown RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 TAS2R43P59537 309 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 ERVPABLB-1P60509 514 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 ST8SIA6P61647 398 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 RPS23P62266 143 aaKnown RBP5.29□□□□□ -1.56
CD44-225ENST00000527326 PSG6Q00889 435 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 NHLH1Q02575 133 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 TGIF1Q15583 401 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 C2orf68Q2NKX9 166 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 ZNF750Q32MQ0 723 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 MPPE1Q53F39 396 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 ZNF789Q5FWF6 425 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 SIRPB2Q5JXA9 342 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 PRAMEF14Q5SWL7 426 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 SDHAF4Q5VUM1 108 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 CDCP2Q5VXM1 449 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 METTL7BQ6UX53 244 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 CD300LDQ6UXZ3 194 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 FBXW12Q6X9E4 464 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 CLEC20AQ6ZU45 233 aa5.29□□□□□ -1.56
CD44-225ENST00000527326 KCTD9Q7L273 389 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms