RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 HIST3H3Q16695 136 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 CEACAM16Q2WEN9 425 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 ZBED5Q49AG3 693 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 HIKESHIQ53FT3 197 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 ARMC4Q5T2S8 1044 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 ANKRD16Q6P6B7 361 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 ZNF773Q6PK81 442 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 SPNS3Q6ZMD2 512 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 C20orf204Q6ZNR8 217 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 MBOAT2Q6ZWT7 520 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 CYP4Z1Q86W10 505 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 NRMQ8IXM6 262 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 ATG16L2Q8NAA4 619 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 MOSPD2Q8NHP6 518 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 GIPC3Q8TF64 312 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 BPIFA2Q96DR5 249 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 ADAD1Q96M93 576 aaKnown RBP9.8□□□□□ -0.84
CTSB-214ENST00000527243 MBOAT4Q96T53 435 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 MRPL13Q9BYD1 178 aaKnown RBP9.8□□□□□ -0.84
CTSB-214ENST00000527243 ESRP2Q9H6T0 727 aaKnown RBP9.8□□□□□ -0.84
CTSB-214ENST00000527243 CRLF2Q9HC73 371 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 PAPOLBQ9NRJ5 636 aaKnown RBP9.8□□□□□ -0.84
CTSB-214ENST00000527243 KRT84Q9NSB2 600 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 PDP1Q9P0J1 537 aaPredicted RBP9.8□□□□□ -0.84
CTSB-214ENST00000527243 CRNNQ9UBG3 495 aaPredicted RBP9.8□□□□□ -0.84
CTSB-214ENST00000527243 PCDHGB5Q9Y5G0 923 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 SNX5Q9Y5X3 404 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 ITPR3Q14573 2671 aa9.8□□□□□ -0.84
CTSB-214ENST00000527243 ARID1AO14497 2285 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 TRBV4-1A0A0J9YWV2 114 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 ARRDC5A6NEK1 342 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 ZNF99A8MXY4 864 aaPredicted RBP9.79□□□□□ -0.84
CTSB-214ENST00000527243 BLOC1S5-TXNDC5H3BN57 136 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 TNFRSF11BO00300 401 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 CDC42EP2O14613 210 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 RNF13O43567 381 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 SERPINI2O75830 405 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 KRT33AO76009 404 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 DIRAS1O95057 198 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 OR6A2O95222 327 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 HIST1H2ABP04908 130 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 F13BP05160 661 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 H1F0P07305 194 aaKnown RBP9.79□□□□□ -0.84
CTSB-214ENST00000527243 CD3EP07766 207 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 CCDC159P0C7I6 412 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 PGA4P0DJD7 388 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 PGA3P0DJD8 388 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 EEF1B2P24534 225 aaKnown RBP9.79□□□□□ -0.84
CTSB-214ENST00000527243 DNASE1P24855 282 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 PTAFRP25105 342 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 CD40P25942 277 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 LIMS1P48059 325 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 ZNF133P52736 654 aaPredicted RBP9.79□□□□□ -0.84
CTSB-214ENST00000527243 PRPS1P60891 318 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 CXCR4P61073 352 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 RUNX1T1Q06455 604 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 CAMK2DQ13557 499 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 MELKQ14680 651 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 LAPTM4AQ15012 233 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 SEC23BQ15437 767 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 DEFB113Q30KQ7 82 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 ZNF691Q5VV52 312 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 CARD17Q5XLA6 110 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 KDM4DQ6B0I6 523 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 ALKBH2Q6NS38 261 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 FAHD1Q6P587 224 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 PODNL1Q6PEZ8 512 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 LRFN4Q6PJG9 635 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 TMPRSS11FQ6ZWK6 438 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 HIST3H2AQ7L7L0 130 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 GPR137CQ8N3F9 429 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 ZNF611Q8N823 705 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 FAM169BQ8N8A8 192 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 ZNF420Q8TAQ5 688 aaPredicted RBP9.79□□□□□ -0.84
CTSB-214ENST00000527243 ASB10Q8WXI3 467 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 AKAP1Q92667 903 aaKnown RBP eCLIP9.79□□□□□ -0.84
CTSB-214ENST00000527243 NEUROG1Q92886 237 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 HIST1H2ACQ93077 130 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 ZNF566Q969W8 418 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 NMD3Q96D46 503 aaKnown RBP9.79□□□□□ -0.84
CTSB-214ENST00000527243 SLC25A44Q96H78 314 aaPredicted RBP9.79□□□□□ -0.84
CTSB-214ENST00000527243 ALPK1Q96QP1 1244 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 PIP5K1AQ99755 562 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 ZNF556Q9HAH1 456 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 CCNB1IP1Q9NPC3 277 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 INIPQ9NRY2 104 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 SCN3BQ9NY72 215 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 RSL24D1Q9UHA3 163 aaKnown RBP9.79□□□□□ -0.84
CTSB-214ENST00000527243 EDARQ9UNE0 448 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 TPRKBQ9Y3C4 175 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 U3KQV3 271 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 MAP1AP78559 2803 aaPredicted RBP9.79□□□□□ -0.84
CTSB-214ENST00000527243 USF3Q68DE3 2245 aa9.79□□□□□ -0.84
CTSB-214ENST00000527243 TEP1Q99973 2627 aaKnown RBP9.78□□□□□ -0.84
CTSB-214ENST00000527243 ZNF503-AS2A6NEH8 195 aa9.78□□□□□ -0.84
CTSB-214ENST00000527243 ZNF726A6NNF4 738 aa9.78□□□□□ -0.84
CTSB-214ENST00000527243 CENPBD1B2RD01 187 aa9.78□□□□□ -0.84
CTSB-214ENST00000527243 M0R3G1 203 aa9.78□□□□□ -0.84
CTSB-214ENST00000527243 BCL10O95999 233 aa9.78□□□□□ -0.84
CTSB-214ENST00000527243 IGLV1-44P01699 117 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms