RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 FOXF2Q12947 444 aa15.21■□□□□ 0.03
CCS-204ENST00000526066 TOP3AQ13472 1001 aaPredicted RBP15.21■□□□□ 0.03
CCS-204ENST00000526066 ACSM5Q6NUN0 579 aa15.21■□□□□ 0.03
CCS-204ENST00000526066 ADCK1Q86TW2 530 aa15.21■□□□□ 0.03
CCS-204ENST00000526066 TMEM123Q8N131 208 aa15.21■□□□□ 0.03
CCS-204ENST00000526066 IQCF1Q8N6M8 205 aa15.21■□□□□ 0.03
CCS-204ENST00000526066 SLC25A44Q96H78 314 aaPredicted RBP15.21■□□□□ 0.03
CCS-204ENST00000526066 OR2M2Q96R28 347 aa15.21■□□□□ 0.03
CCS-204ENST00000526066 SNX18Q96RF0 628 aa15.21■□□□□ 0.03
CCS-204ENST00000526066 PITX2Q99697 317 aa15.21■□□□□ 0.03
CCS-204ENST00000526066 CCL19Q99731 98 aa15.21■□□□□ 0.03
CCS-204ENST00000526066 PRRG3Q9BZD7 231 aa15.21■□□□□ 0.03
CCS-204ENST00000526066 FAM118AQ9NWS6 357 aa15.21■□□□□ 0.03
CCS-204ENST00000526066 FN1P02751 2386 aaKnown RBP15.2■□□□□ 0.02
CCS-204ENST00000526066 TEX13CA0A0J9YWL9 993 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 OR6C65A6NJZ3 312 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 TNFSF13O75888 250 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 ACADSP16219 412 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 NOS3P29474 1203 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 ACVR1BP36896 505 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 HSPA13P48723 471 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 AQP4P55087 323 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 MYBPC1Q00872 1141 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 KRR1Q13601 381 aaKnown RBP15.2■□□□□ 0.02
CCS-204ENST00000526066 MELKQ14680 651 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 TMEM236Q5W0B7 351 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 C12orf73Q69YU5 71 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 PRSS57Q6UWY2 283 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 CASP12Q6UXS9 341 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 IZUMO2Q6UXV1 221 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 NUFIP2Q7Z417 695 aaKnown RBP15.2■□□□□ 0.02
CCS-204ENST00000526066 DHRSXQ8N5I4 330 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 ZNF775Q96BV0 537 aaPredicted RBP15.2■□□□□ 0.02
CCS-204ENST00000526066 LRR1Q96L50 414 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 ALG12Q9BV10 488 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 EMC6Q9BV81 110 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 MRPL13Q9BYD1 178 aaKnown RBP15.2■□□□□ 0.02
CCS-204ENST00000526066 UBTD1Q9HAC8 227 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 CMC2Q9NRP2 79 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 KLHL21Q9UJP4 597 aa15.2■□□□□ 0.02
CCS-204ENST00000526066 NDRG4Q9ULP0 352 aaKnown RBP15.2■□□□□ 0.02
CCS-204ENST00000526066 HIVEP2P31629 2446 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 ARID1AO14497 2285 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 MED12LQ86YW9 2145 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 LOC100130705A0A1B0GUX0 176 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 H0YAE9 185 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 XKRYO14609 159 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 SLC43A1O75387 559 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 TRMUO75648 421 aaKnown RBP15.19■□□□□ 0.02
CCS-204ENST00000526066 SMNDC1O75940 238 aaKnown RBP eCLIP15.19■□□□□ 0.02
CCS-204ENST00000526066 IFNGP01579 166 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 IGHG1P01857 330 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 PGA4P0DJD7 388 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 PGA3P0DJD8 388 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 NR2C1P13056 603 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 HIST1H1CP16403 213 aaKnown RBP15.19■□□□□ 0.02
CCS-204ENST00000526066 OR3A2P47893 321 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 SELENOPP49908 381 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 ADARB1P78563 741 aaKnown RBP15.19■□□□□ 0.02
CCS-204ENST00000526066 MESTQ5EB52 335 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 ZNF362Q5T0B9 420 aaPredicted RBP15.19■□□□□ 0.02
CCS-204ENST00000526066 TTC23Q5W5X9 447 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 NIPAL3Q6P499 406 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 CNEP1R1Q8N9A8 125 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 ZNF555Q8NEP9 628 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 FNDC8Q8TC99 324 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 ZNF566Q969W8 418 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 APH1AQ96BI3 265 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 RASD2Q96D21 266 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 SLC38A2Q96QD8 506 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 KCNK17Q96T54 332 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 MED18Q9BUE0 208 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 ADI1Q9BV57 179 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 LINC00470Q9BZP3 86 aa15.19■□□□□ 0.02
CCS-204ENST00000526066 PRSS37A4D1T9 235 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 RIIAD1A6NNX1 92 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 SURF4O15260 269 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 CNOT4O95628 575 aaKnown RBP15.18■□□□□ 0.02
CCS-204ENST00000526066 CD8BP10966 210 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 GGT2P36268 569 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 SIRPAP78324 504 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 RUNX1T1Q06455 604 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 HIST3H3Q16695 136 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 SLC35F1Q5T1Q4 408 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 PRIMA1Q86XR5 153 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 WDFY1Q8IWB7 410 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 C20orf196Q8IYI0 205 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 ZNF100Q8IYN0 542 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 POMGNT2Q8NAT1 580 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 NOXO1Q8NFA2 376 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 OR4K13Q8NH42 304 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 HDAC2Q92769 488 aaKnown RBP15.18■□□□□ 0.02
CCS-204ENST00000526066 TMEM54Q969K7 222 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 STARD4Q96DR4 205 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 PIK3IP1Q96FE7 263 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 PERPQ96FX8 193 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 SLCO5A1Q9H2Y9 848 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 PLSCR4Q9NRQ2 329 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 GMPPBQ9Y5P6 360 aa15.18■□□□□ 0.02
CCS-204ENST00000526066 VPS13CQ709C8 3753 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms