RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 RIOK2Q9BVS4 552 aaKnown RBP10.26□□□□□ -0.77
CLNS1A-204ENST00000525428 UCK1Q9HA47 277 aa10.26□□□□□ -0.77
CLNS1A-204ENST00000525428 CA14Q9ULX7 337 aa10.26□□□□□ -0.77
CLNS1A-204ENST00000525428 A0A1B0GTH9 108 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 A0A1B0GWJ7 208 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 NPIPB9F8W1W9 429 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 OR10H2O60403 315 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 FBXO24O75426 580 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 TXNDC12O95881 172 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 FAM157CP0CG43 387 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 ZNF28P17035 718 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 PPM1AP35813 382 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 LPAR6P43657 344 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 CSNK1EP49674 416 aaKnown RBP10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 SKP1P63208 163 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 VWA2Q5GFL6 755 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 ATPAF1Q5TC12 328 aaPredicted RBP10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 SLC43A2Q8N370 569 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 MOAP1Q96BY2 351 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 GAR1Q9NY12 217 aaKnown RBP10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 AHSPQ9NZD4 102 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 LPAR3Q9UBY5 353 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 CACFD1Q9UGQ2 172 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 CLEC4EQ9ULY5 219 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 DCTN6O00399 190 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 SLC25A4P12235 298 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 PRSS3P35030 304 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 CCR2P41597 374 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 RELQ04864 619 aaPredicted RBP10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 EIF2B1Q14232 305 aaKnown RBP10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 KHDRBS2Q5VWX1 349 aaKnown RBP10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 RPL22L1Q6P5R6 122 aaKnown RBP10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 REC114Q7Z4M0 266 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 GABRG1Q8N1C3 465 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 FRMD1Q8N878 549 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 RASGEF1AQ8N9B8 481 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 AVL9Q8NBF6 648 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 NUDCD2Q8WVJ2 157 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 ROBO4Q8WZ75 1007 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 CPNE4Q96A23 557 aaPredicted RBP10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 KIRREL1Q96J84 757 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 KRCC1Q9NPI7 259 aaPredicted RBP10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 HCFC2Q9Y5Z7 792 aa10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 ZNF106Q9H2Y7 1883 aaKnown RBP10.25□□□□□ -0.77
CLNS1A-204ENST00000525428 CENPVL1A0A0U1RR11 272 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 H7BY64 318 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 XRCC3O43542 346 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 LILRB5O75023 590 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 LRP3O75074 770 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 C1orf105O95561 183 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 TBX6O95947 436 aaPredicted RBP10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 ADH1CP00326 375 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 SNRPCP09234 159 aaKnown RBP10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 TEX30Q5JUR7 227 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 TMEM244Q5VVB8 128 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 PAPD4Q6PIY7 484 aaKnown RBP10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 TMEM220Q6QAJ8 160 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 IL34Q6ZMJ4 242 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 CHST9Q7L1S5 443 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 SLC35F3Q8IY50 421 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 MRPL43Q8N983 215 aaKnown RBP10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 FOXRED1Q96CU9 486 aaPredicted RBP10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 RRNAD1Q96FB5 475 aaKnown RBP10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 CMTM3Q96MX0 182 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 LMF1Q96S06 567 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 ACTRT3Q9BYD9 372 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 RAB33BQ9H082 229 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 RGCCQ9H4X1 137 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 TMEM100Q9NV29 134 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 TAS2R8Q9NYW2 309 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 SLC35A3Q9Y2D2 325 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 MYO15AQ9UKN7 3530 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 MOSPD3O75425 235 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 ITGB2P05107 769 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 RAB6AP20340 208 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 BSGP35613 385 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 PDX1P52945 283 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 NUBP1P53384 320 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 ACTC1P68032 377 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 ACTA1P68133 377 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 GFI1BQ5VTD9 330 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 ZNF627Q7L945 461 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 BHLHE23Q8NDY6 225 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 OR4S1Q8NGB4 309 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 ZNRF4Q8WWF5 429 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 IGFLR1Q9H665 355 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 BCL2L10Q9HD36 194 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 LHX9Q9NQ69 397 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 CLDND1Q9NY35 253 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 UPB1Q9UBR1 384 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 ZNF346Q9UL40 294 aaKnown RBP10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 ZDHHC8Q9ULC8 765 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 MMP24Q9Y5R2 645 aa10.24□□□□□ -0.77
CLNS1A-204ENST00000525428 TRAV8-7A0A075B6U6 113 aa10.23□□□□□ -0.77
CLNS1A-204ENST00000525428 A0A1B0GTI1 187 aa10.23□□□□□ -0.77
CLNS1A-204ENST00000525428 EPOPA6NHQ4 379 aa10.23□□□□□ -0.77
CLNS1A-204ENST00000525428 MSGN1A6NI15 193 aa10.23□□□□□ -0.77
CLNS1A-204ENST00000525428 ZIC2O95409 532 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms