RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 NDUFB7P17568 137 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 ITGB7P26010 798 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 ARSDP51689 593 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 SIRPAP78324 504 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 VEZF1Q14119 521 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 LRRC56Q8IYG6 542 aaPredicted RBP12.65□□□□□ -0.38
LRRK1-202ENST00000525284 SLC22A24Q8N4F4 322 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 ZNF561Q8N587 486 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 PLPP7Q8NBV4 271 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 DHRS4Q9BTZ2 278 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 CALHM2Q9HA72 323 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 MSL2Q9HCI7 577 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 DMRT3Q9NQL9 472 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 KCNG2Q9UJ96 466 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 NOSIPQ9Y314 301 aaKnown RBP12.65□□□□□ -0.38
LRRK1-202ENST00000525284 IGLV3-22A0A075B6J6 115 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 ADAM23O75077 832 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 ZNF93P35789 620 aaPredicted RBP12.65□□□□□ -0.38
LRRK1-202ENST00000525284 GATMP50440 423 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 LBX2Q6XYB7 198 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 LHX4Q969G2 390 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 BARHL1Q9BZE3 327 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 AQP8O94778 261 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 SLC10A3P09131 477 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 ACSM4P0C7M7 580 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 CALCRP30988 508 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 SLC12A9Q9BXP2 914 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 GSTO2Q9H4Y5 243 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 IFT22Q9H7X7 185 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 DEGS1O15121 323 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 ZNF354AO60765 605 aaPredicted RBP12.65□□□□□ -0.38
LRRK1-202ENST00000525284 ABHD16AO95870 558 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 F2P00734 622 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 FOXA1P55317 472 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 FKBP1BP68106 108 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 RBPJQ06330 500 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 GPR17Q13304 367 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 ERV3-1Q14264 604 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 OXA1LQ15070 435 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 GLYATL3Q5SZD4 288 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 C11orf49Q9H6J7 331 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 RNF224P0DH78 156 aa12.65□□□□□ -0.39
LRRK1-202ENST00000525284 RPL29P47914 159 aaKnown RBP12.65□□□□□ -0.39
LRRK1-202ENST00000525284 RABEPKQ7Z6M1 372 aa12.65□□□□□ -0.39
LRRK1-202ENST00000525284 RETREG3Q86VR2 466 aa12.65□□□□□ -0.39
LRRK1-202ENST00000525284 CD200R1Q8TD46 325 aa12.65□□□□□ -0.39
LRRK1-202ENST00000525284 KCTD12Q96CX2 325 aaKnown RBP12.65□□□□□ -0.39
LRRK1-202ENST00000525284 TRAPPC1Q9Y5R8 145 aa12.65□□□□□ -0.39
LRRK1-202ENST00000525284 SLC25A4P12235 298 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 ACOT6Q3I5F7 207 aaPredicted RBP12.64□□□□□ -0.39
LRRK1-202ENST00000525284 FRMPD2BQ6IN97 320 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 NMNAT3Q96T66 252 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 TIMM29Q9BSF4 260 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 ACSS1Q9NUB1 689 aaPredicted RBP12.64□□□□□ -0.39
LRRK1-202ENST00000525284 B3GAT1Q9P2W7 334 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 ST8SIA3O43173 380 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 IAPPP10997 89 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 ERVFC1-1P60608 527 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 RAB1AP62820 205 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 CST6Q15828 149 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 DEFB133Q30KQ1 61 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 PLK5Q496M5 336 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 AAED1Q7RTV5 226 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 SUSD2Q9UGT4 822 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 FAM208AQ9UK61 1670 aaKnown RBP12.64□□□□□ -0.39
LRRK1-202ENST00000525284 GPRIN2O60269 458 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 PAPLNO95428 1278 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 HOXD13P35453 343 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 ECI1P42126 302 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 ZP2Q05996 745 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 UBE3DQ7Z6J8 389 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 TUSC5Q8IXB3 177 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 OR4A4PQ8NGN8 299 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 TRABD2BA6NFA1 517 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 GABRR3A8MPY1 467 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 GPR171O14626 319 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 OPRD1P41143 372 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 PPOXP50336 477 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 ZNF154Q13106 437 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 ISCA2Q86U28 154 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 FAM3DQ96BQ1 224 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 MRIQ9BWK5 157 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 LYRM2Q9NU23 88 aaPredicted RBP12.64□□□□□ -0.39
LRRK1-202ENST00000525284 CNMDO75829 334 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 MOGAT2Q3SYC2 334 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 Q499Y3 187 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 GLIPR1L1Q6UWM5 242 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 ACOT4Q8N9L9 421 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 OR10AD1Q8NGE0 317 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 ZNF778Q96MU6 729 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 IGSF5Q9NSI5 407 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 KIAA1456Q9P272 454 aa12.64□□□□□ -0.39
LRRK1-202ENST00000525284 TRBV4-1A0A0J9YWV2 114 aa12.63□□□□□ -0.39
LRRK1-202ENST00000525284 GASTP01350 101 aa12.63□□□□□ -0.39
LRRK1-202ENST00000525284 FCGR2CP31995 323 aa12.63□□□□□ -0.39
LRRK1-202ENST00000525284 SPINT3P49223 89 aa12.63□□□□□ -0.39
LRRK1-202ENST00000525284 SLC10A2Q12908 348 aaPredicted RBP12.63□□□□□ -0.39
LRRK1-202ENST00000525284 CORO6Q6QEF8 472 aa12.63□□□□□ -0.39
LRRK1-202ENST00000525284 DYNC2LI1Q8TCX1 351 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms