RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 PAPD5Q8NDF8 572 aaKnown RBP10.89□□□□□ -0.67
SMCO4-202ENST00000525141 OR2T29Q8NH02 315 aa10.89□□□□□ -0.67
SMCO4-202ENST00000525141 OR6X1Q8NH79 312 aa10.89□□□□□ -0.67
SMCO4-202ENST00000525141 CANT1Q8WVQ1 401 aa10.89□□□□□ -0.67
SMCO4-202ENST00000525141 ZDHHC16Q969W1 377 aa10.89□□□□□ -0.67
SMCO4-202ENST00000525141 ZNF75AQ96N20 296 aa10.89□□□□□ -0.67
SMCO4-202ENST00000525141 EMC6Q9BV81 110 aa10.89□□□□□ -0.67
SMCO4-202ENST00000525141 CHID1Q9BWS9 393 aa10.89□□□□□ -0.67
SMCO4-202ENST00000525141 YY1AP1Q9H869 796 aa10.89□□□□□ -0.67
SMCO4-202ENST00000525141 INIPQ9NRY2 104 aa10.89□□□□□ -0.67
SMCO4-202ENST00000525141 FAIMQ9NVQ4 179 aa10.89□□□□□ -0.67
SMCO4-202ENST00000525141 POU2F3Q9UKI9 436 aa10.89□□□□□ -0.67
SMCO4-202ENST00000525141 TMCC3Q9ULS5 477 aa10.89□□□□□ -0.67
SMCO4-202ENST00000525141 LYVE1Q9Y5Y7 322 aa10.89□□□□□ -0.67
SMCO4-202ENST00000525141 DNHD1Q96M86 4753 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 A0A1W2PRG6 482 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 H7C417 338 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 CDC42EP2O14613 210 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 PTP4A3O75365 173 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 KRT33AO76009 404 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 LY6HO94772 140 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 BCL10O95999 233 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 CBR1P16152 277 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 IFNGR2P38484 337 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 TAF11Q15544 211 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 CEACAM16Q2WEN9 425 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 ZBED5Q49AG3 693 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 ALG10Q5BKT4 473 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 FAM169BQ8N8A8 192 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 SLC25A44Q96H78 314 aaPredicted RBP10.88□□□□□ -0.67
SMCO4-202ENST00000525141 FAM46AQ96IP4 442 aaKnown RBP10.88□□□□□ -0.67
SMCO4-202ENST00000525141 SLC38A2Q96QD8 506 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 TNFRSF13CQ96RJ3 184 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 CRLF2Q9HC73 371 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 OBP2BQ9NPH6 170 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 MED29Q9NX70 200 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 B3GNT2Q9NY97 397 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 AURKCQ9UQB9 309 aa10.88□□□□□ -0.67
SMCO4-202ENST00000525141 FBN1P35555 2871 aaKnown RBP10.88□□□□□ -0.67
SMCO4-202ENST00000525141 TMEM129A0AVI4 362 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 CENPBD1B2RD01 187 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 M0R3G1 203 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 TNFRSF11BO00300 401 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 F12P00748 615 aaPredicted RBP10.87□□□□□ -0.67
SMCO4-202ENST00000525141 IGKV3-15P01624 115 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 F13BP05160 661 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 IGFBP1P08833 259 aaPredicted RBP10.87□□□□□ -0.67
SMCO4-202ENST00000525141 CECR9P0C854 216 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 GPR4P46093 362 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 DAP3P51398 398 aaKnown RBP10.87□□□□□ -0.67
SMCO4-202ENST00000525141 SH3BGRP55822 239 aaPredicted RBP10.87□□□□□ -0.67
SMCO4-202ENST00000525141 BIDP55957 195 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 NAAAQ02083 359 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 RAB35Q15286 201 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 C3orf36Q3SXR2 165 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 HMBOX1Q6NT76 420 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 C1orf94Q6P1W5 598 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 HDDC2Q7Z4H3 204 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 ZER1Q7Z7L7 766 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 GPR137CQ8N3F9 429 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 LRRC75AQ8NAA5 344 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 OR4C15Q8NGM1 316 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 OR51A7Q8NH64 312 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 MOSPD2Q8NHP6 518 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 MDFIQ99750 246 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 TXNIPQ9H3M7 391 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 REEP1Q9H902 201 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 BARX1Q9HBU1 254 aaPredicted RBP10.87□□□□□ -0.67
SMCO4-202ENST00000525141 B3GAT2Q9NPZ5 323 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 STX18Q9P2W9 335 aaKnown RBP10.87□□□□□ -0.67
SMCO4-202ENST00000525141 SIGLEC7Q9Y286 467 aa10.87□□□□□ -0.67
SMCO4-202ENST00000525141 TRAV27A0A087WT01 109 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 OR10H3O60404 316 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 CRLF1O75462 422 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 SERPINI2O75830 405 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 SEC14L2O76054 403 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 CST1P01037 141 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 IGHMP01871 453 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 PAX7P23759 505 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 FPR3P25089 353 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 CAMK2DQ13557 499 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 ADIPOQQ15848 244 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 HIST3H3Q16695 136 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 MICAQ29983 383 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 ARMC4Q5T2S8 1044 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 C1orf146Q5VVC0 180 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 CARD17Q5XLA6 110 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 LRFN4Q6PJG9 635 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 THSD4Q6ZMP0 1018 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 MEX3DQ86XN8 651 aaKnown RBP10.86□□□□□ -0.67
SMCO4-202ENST00000525141 ZNF525Q8N782 197 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 OR13C2Q8NGS9 318 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 FGFBP3Q8TAT2 258 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 GNPDA2Q8TDQ7 276 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 ASB10Q8WXI3 467 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 TMEM54Q969K7 222 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 ZNF566Q969W8 418 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 UTP4Q969X6 686 aaKnown RBP10.86□□□□□ -0.67
SMCO4-202ENST00000525141 FBXO17Q96EF6 278 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 DUS3LQ96G46 650 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms