RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 IGHV4-30-2A0A087WSY4 118 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 TRBV4-1A0A0J9YWV2 114 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 B9A039 149 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 ARPC2O15144 300 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 GPRIN2O60269 458 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 FARS2O95363 451 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 CCL2P13500 99 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZNF35P13682 527 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 RHCEP18577 417 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 NPR2P20594 1047 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 NR4A1P22736 598 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 RPL4P36578 427 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 EFNA4P52798 201 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 ERVK-25P63136 954 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 KRT72Q14CN4 511 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 SEC23BQ15437 767 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 SGCAQ16586 387 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 MSMPQ1L6U9 139 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZBED5Q49AG3 693 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 SLC25A47Q6Q0C1 308 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 CLEC2AQ6UVW9 174 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 TMPRSS11FQ6ZWK6 438 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 SLC16A14Q7RTX9 510 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 HDDC2Q7Z4H3 204 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZNF584Q8IVC4 421 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 NMD3Q96D46 503 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 KCNK17Q96T54 332 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 STX18Q9P2W9 335 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 MAGEL2Q9UJ55 1249 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 UGT2A1Q9Y4X1 527 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 NF1P21359 2839 aa11.1□□□□□ -0.63
TRAPPC4-205ENST00000525079 TMEM129A0AVI4 362 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 NPIPB13A6NJU9 1138 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 VSTM5A8MXK1 200 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 B2RBV5 119 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 CENPBD1B2RD01 187 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 NPIPB4C9JG80 1138 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 H7C1C5 153 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 F12P00748 615 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 IGHMP01871 453 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 SERPINA5P05154 406 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZNF26P17031 533 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 SLC9A3P48764 834 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZNF133P52736 654 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 LCN6P62502 163 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 TAF11Q15544 211 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 EFNB3Q15768 340 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 FXNQ16595 210 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 SLC36A2Q495M3 483 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 IQCCQ4KMZ1 466 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 C10orf128Q5T292 105 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 GKAP1Q5VSY0 366 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 TMEM53Q6P2H8 277 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZCCHC24Q8N2G6 241 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 OR10H5Q8NGA6 315 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZNF519Q8TB69 540 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 POM121Q96HA1 1249 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 NSL1Q96IY1 281 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 NSMCE2Q96MF7 247 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 RBP7Q96R05 134 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 DOK1Q99704 481 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 OR51B6Q9H340 312 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 PLK3Q9H4B4 646 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 ANKRD19PQ9H560 264 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 DENND2DQ9H6A0 471 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZNF442Q9H7R0 627 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 FZR1Q9UM11 496 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 ADAM18Q9Y3Q7 739 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 CMAHPQ9Y471 501 aa11.09□□□□□ -0.63
TRAPPC4-205ENST00000525079 CR1P17927 2039 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 A0A1W2PRQ8 180 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 ENTPD5O75356 428 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 PDE5AO76074 875 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 FAM107AO95990 144 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 SEMG1P04279 462 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 FAM157BP0CG42 384 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 PCSK6P29122 969 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 OMPP47874 163 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 MRPS34P82930 218 aaKnown RBP11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 GALK2Q01415 458 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 SPIBQ01892 262 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 KRTAP1-1Q07627 177 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 DGCR6Q14129 220 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 CARTPTQ16568 116 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 CYP2R1Q6VVX0 501 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 RINLQ6ZS11 566 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 PAQR4Q8N4S7 273 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 ARIH2OSQ8N7S6 290 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 CCDC197Q8NCU1 140 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 SLC30A7Q8NEW0 376 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 FAM168AQ92567 244 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 NABP1Q96AH0 204 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 MCUR1Q96AQ8 359 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 Q96M85 177 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 ALG12Q9BV10 488 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 MRPL37Q9BZE1 423 aaKnown RBP11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 SIAEQ9HAT2 523 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 CCNB1IP1Q9NPC3 277 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 NDE1Q9NXR1 346 aa11.08□□□□□ -0.64
TRAPPC4-205ENST00000525079 GRHPRQ9UBQ7 328 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms