RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 LRRC18Q8N456 261 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 OR51A7Q8NH64 312 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 MRPL24Q96A35 216 aaKnown RBP16■□□□□ 0.15
CAPN1-203ENST00000525013 MRPL37Q9BZE1 423 aaKnown RBP16■□□□□ 0.15
CAPN1-203ENST00000525013 NSRP1Q9H0G5 558 aaKnown RBP16■□□□□ 0.15
CAPN1-203ENST00000525013 TXNIPQ9H3M7 391 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 MAN2C1Q9NTJ4 1040 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 FZR1Q9UM11 496 aa16■□□□□ 0.15
CAPN1-203ENST00000525013 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.99■□□□□ 0.154e-6■□□□□ 8
CAPN1-203ENST00000525013 KIAA1324LA8MWY0 1029 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-203ENST00000525013 FFAR1O14842 300 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 SLC2A10O95528 541 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 DAOP14920 347 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 MAKP20794 623 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 NR4A2P43354 598 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 PLP2Q04941 152 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 MSMPQ1L6U9 139 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 IQCCQ4KMZ1 466 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 CYB5R2Q6BCY4 276 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 CPLX4Q7Z7G2 160 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 DPPA2Q7Z7J5 298 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 IGFN1Q86VF2 1251 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 ZNF584Q8IVC4 421 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 SLC30A7Q8NEW0 376 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 NEU4Q8WWR8 484 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-203ENST00000525013 NSMAFQ92636 917 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 HDAC2Q92769 488 aaKnown RBP15.99■□□□□ 0.15
CAPN1-203ENST00000525013 SEPHS2Q99611 448 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 SYT3Q9BQG1 590 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 MYLK2Q9H1R3 596 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 KCNN2Q9H2S1 579 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 CDH20Q9HBT6 801 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 ADAM21Q9UKJ8 722 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 HIF3AQ9Y2N7 669 aa15.99■□□□□ 0.15
CAPN1-203ENST00000525013 TRAV27A0A087WT01 109 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 NPIPB13A6NJU9 1138 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 EFCAB9A8MZ26 197 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 VWC2LB2RUY7 222 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 NPIPB4C9JG80 1138 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 SYNGR3O43761 229 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 CCL2P13500 99 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 CDAP32320 146 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 CTXN1P60606 82 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 PRKCDQ05655 676 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 FMODQ06828 376 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 TAF11Q15544 211 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 NRN1LQ496H8 165 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 C10orf128Q5T292 105 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 C6orf52Q5T4I8 152 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 RRM2BQ7LG56 351 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 OAFQ86UD1 273 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 CYP4Z1Q86W10 505 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 RBM15BQ8NDT2 890 aaKnown RBP15.98■□□□□ 0.15
CAPN1-203ENST00000525013 ACOT11Q8WXI4 607 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-203ENST00000525013 OR51B6Q9H340 312 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 TPK1Q9H3S4 243 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 ADA2Q9NZK5 511 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 REV1Q9UBZ9 1251 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 EGFL7Q9UHF1 273 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 SLC7A8Q9UHI5 535 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 DUSP13Q9UII6 198 aa15.98■□□□□ 0.15
CAPN1-203ENST00000525013 ANK3Q12955 4377 aaKnown RBP15.98■□□□□ 0.15
CAPN1-203ENST00000525013 COL6A5A8TX70 2615 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 IQCMA0A1B0GVH7 501 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 M0R233 179 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 GMNNO75496 209 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 PTHP01270 115 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 FAM157BP0CG42 384 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 NR2C1P13056 603 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 DRD4P21917 467 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 EVX1P49640 407 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 RPL27P61353 136 aaKnown RBP15.97■□□□□ 0.15
CAPN1-203ENST00000525013 HSF2Q03933 536 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 SGCAQ16586 387 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 FXNQ16595 210 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 TBPL2Q6SJ96 375 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 LRP11Q86VZ4 500 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 HIPK1Q86Z02 1210 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 RNF113BQ8IZP6 322 aaKnown RBP15.97■□□□□ 0.15
CAPN1-203ENST00000525013 PAQR4Q8N4S7 273 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-203ENST00000525013 ZNF540Q8NDQ6 660 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 OR1J2Q8NGS2 313 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 OR13C2Q8NGS9 318 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 RBP7Q96R05 134 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 KCNK17Q96T54 332 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 LRMDAQ9H2I8 198 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 C1orf198Q9H425 327 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 SIAEQ9HAT2 523 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 CCNB1IP1Q9NPC3 277 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 SPAG4Q9NPE6 437 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 ABCD2Q9UBJ2 740 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 RPS6KA6Q9UK32 745 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 ZNF346Q9UL40 294 aaKnown RBP15.97■□□□□ 0.15
CAPN1-203ENST00000525013 ENPP4Q9Y6X5 453 aa15.97■□□□□ 0.15
CAPN1-203ENST00000525013 A0A087WUU8 490 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 A0A1W2PPW3 197 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 SNX3O60493 162 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 STAMBPO95630 424 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 IGFBP1P08833 259 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-203ENST00000525013 IGHV4-31P0DP07 118 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms